KEGG   Helicoverpa armigera (cotton bollworm): 110384442
Entry
110384442         CDS       T05609                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair endonuclease XPF
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03420  Nucleotide excision repair
haw03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    110384442
   03460 Fanconi anemia pathway
    110384442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haw03032]
    110384442
   03400 DNA repair and recombination proteins [BR:haw03400]
    110384442
DNA replication proteins [BR:haw03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    110384442
DNA repair and recombination proteins [BR:haw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     110384442
SSDB
Motif
Pfam: ERCC4 Rhodanese
Other DBs
NCBI-GeneID: 110384442
NCBI-ProteinID: XP_063893684
LinkDB
Position
13:complement(join(4265226..4265381,4265464..4265658,4265789..4265929,4266038..4266342,4266415..4266511,4266591..4266902,4267171..4267610,4267702..4267856,4268015..4268151,4268276..4268441,4268618..4268730,4268801..4268981,4269056..4269208,4269299..4269435))
AA seq 895 aa
MESTDTNTADAEKGLDDVELKYTLLPFERQIFVDAFEKEALVVMAKGINYNNIISNLLWI
YKDPEHLVFVLNSGEQEEKYFTEKFGLSPLPNLGTDREKAYLEGGIHFVSTRILVVDLLK
NRVPISHITGIIVLRAHTVLESCQEAFALRLYRQNNKTGFVKAFSNSPISFTFGYNHVEK
VMRALFVTELFLWPRFHGSIIKSLKSRQAEVVELHVPLTTNMRFIQTCLLDIINYTVKQL
KSINRTLDMQEITTENCITKKFHKILQSQLDCVWHQLSTRTKEYIQDLKVLRSMAVNLID
DDAVSFHALVSKYSTQEYAQVNSGWILLESAEQLFRIARGRVFNHKQEFDPEHCPKWKCL
SDLLLKEIPEEVKKKDGANLNNTKILVLCQDNRTCSQLNNFLTMGPHKYLFYMAFRRDLT
INSVSSKYTNLKKPKTEETNDKDTKRKEEAKDNDNKDEEDFNADETKSNYLLTLTQCNAQ
AEAADTSMFEPISQMESLDFTQLEIERPIICIRTFKESGCNFSLERTLEALRPEYVILYH
CDVAAVRQIELFECRKRNDEPKTKVYFVIHDKTIEEQSYLTSLKREKQAFELLIQTKSVM
VVPSYQDGKTDEYFTLNVEHEDNALDTRKAGGQNQQKEKPAVIVDMREFRSDRREPYXIL
YDLQXRFLASXYCDKPDLRSVSRTSVARKSISDLIGSLNSGRLYTQCTQMCRNYSRPILL
IEFDQNKPFNLQGHFVVSTDISGADIQQKLQLLTIHFPRLKLVWSPSPYATAELFYELKQ
GRKNPNVAEALALSGDNTAEDMHYERYNILVHDFVQKLPGVNSKNIARIMDRGKSLDHLI
TLSQDELQTLIENKNDAATLHSILHVKPRPVDANKDDKSYGKKKFGGKPFQNKRK
NT seq 2688 nt   +upstreamnt  +downstreamnt
atggaatcaactgacacaaacacagctgatgctgaaaaaggcttagatgatgttgaacta
aagtatactttactgccattcgaaaggcaaatatttgtagatgcttttgaaaaagaagca
cttgtcgtcatggctaagggaattaattacaataacataatatcaaatttattgtggatt
tacaaagaccctgagcatttggtttttgtgttgaacagtggagaacaagaagaaaaatat
tttactgaaaaatttggattatcacctttgcccaatcttggaactgatagagaaaaagcc
tatttagagggagggatacattttgtttcaactcgcatattagttgtggacttgttgaag
aacagagttcccatttcccatataactggcatcattgttttgagagcacatactgttctc
gaatcatgccaggaagcttttgcattgaggctctacagacaaaataataagactggtttc
gtgaaggcattctcaaattcccctatatcatttacgtttggctacaatcatgtggagaag
gttatgagggcattatttgttacagagctatttctatggccaaggttccatggctcaata
atcaaaagtctcaagagtagacaagcggaagtggtggaactgcatgtgccgctgaccacc
aacatgcggttcattcagacttgcttgcttgatatcataaactacactgtgaaacaactc
aaaagcatcaataggacattggatatgcaggaaataacaacagaaaactgcataacaaaa
aagttccacaaaattcttcagtcacagctagactgtgtttggcatcagttaagtacaaga
acaaaagagtacatacaagatctcaaagtactgcggagcatggctgttaacttgatagat
gatgatgctgtttcattccatgctttagtaagtaaatacagcacacaagaatatgcacag
gtcaactctggatggatacttttagaatcagctgagcagttattccgaatagctagagga
agagtatttaatcataaacaagaattcgatccagaacattgtccaaaatggaaatgcctc
agtgatctgctgttgaaagaaatacctgaagaagttaagaaaaaagatggagccaactta
aataatacgaaaatattagttctttgtcaggataacagaacatgttcccaattaaataat
tttctaactatgggccctcataaatatctattttacatggcgtttagaagagacctcact
ataaatagtgtttcatctaaatatacaaatctgaagaagcctaaaactgaggaaacaaat
gataaagatacaaaacgtaaggaagaagcgaaagataatgataataaagatgaggaagat
tttaatgcagatgaaactaaatctaattacctgctaactttaacacagtgtaatgcccaa
gctgaggcagcagacacaagtatgtttgagccaatttcgcagatggagagtttagatttt
actcaacttgaaatagagaggcccattatttgcattcgaacgttcaaagaaagtggctgc
aacttttccctggagcgtacattagaagcgttgcggccagagtacgtgatcttataccac
tgtgacgtcgccgcagttagacaaatagaactgtttgagtgccgcaaaagaaacgacgaa
cccaaaactaaagtatactttgtaattcatgataaaacaatagaggaacaatcctacctt
acctctctgaagagagagaaacaagcttttgaattattaatccagacaaaaagtgtaatg
gtagtgccatcatatcaggatggcaagacagatgagtattttaccttgaatgtagaacat
gaggacaatgccttagacacacggaaagcaggtgggcaaaatcagcaaaaagagaagcct
gcagttatcgtagacatgagagaatttcgttcagatcgccgtgagccttactaaattcta
tacgatctacaatagcgctttctcgcgtcataatattgcgataaacctgatctacgtagc
gttagccggacatctgttgcgaggaaatctatttccgatttgattggatccctaaattct
ggccgactctacacgcaatgcacccaaatgtgtcgaaattatagtcgccccatacttctt
attgaattcgaccaaaataagccgtttaatttacagggccacttcgtagtgtcgaccgac
atatcaggcgcggacatacaacaaaagcttcaactgctcaccatacacttccctcggttg
aagctggtctggtctccaagcccctatgctactgcagaattattttatgaactaaaacaa
ggtagaaaaaatcctaacgtagcagaagctctagccctcagtggcgataacaccgctgaa
gatatgcattacgagcgatacaacatcctagttcatgattttgtgcaaaagctacccggc
gtcaactcgaaaaatatcgcaagaattatggatcgaggcaaatctttggatcacctcatt
actttatcccaagatgagttacaaactttgatagagaacaaaaatgatgcagcaaccttg
cattctattctacacgtcaagcctcgccccgtggatgcaaataaggacgacaaatcctat
ggaaaaaagaaatttggggggaaaccgttccagaataaaagaaagtga

DBGET integrated database retrieval system