Helicoverpa armigera (cotton bollworm): 110384647
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Entry
110384647 CDS
T05609
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haw03036
]
110384647
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
110384647
Chromosome and associated proteins [BR:
haw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110384647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Motif
Other DBs
NCBI-GeneID:
110384647
NCBI-ProteinID:
XP_021201720
LinkDB
All DBs
Position
27:join(4330632..4330903,4332179..4332822,4333188..4337374)
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AA seq
1700 aa
AA seq
DB search
MGLDQYKVDVLHYINPYLIWVVVHKEGEEDKFFFEQIGIYGIMPQNVTIGDDCVVKTESC
STWMPASVIPMKKALREAAEVWFSPTYIDKKTSIFEDNIHKYGELIVILKDGKEVNILNE
IVDTGFGFEDECLFHKELRDNQLDTRLDYLTIHEVIKQLEEGYKSRKIPKDIWLEVLKSQ
TFVLHEAKMIETSLASRKLHITDGRNVETVLKNKLNALKLCKDVDEDSVGIASTFRSSRP
SSVVSVAMKKKLDWLRSQKIENRKVHTVDDSIKNKSDFDDQVDNPKPANKVLFDGDSNNN
HETKLASSGKKQRWQPTEDNLIAIGPAGLPLNKFSRMLKPQKEEDLQASEKKKAEERKPE
IEVEEEKNPDVYANTDSEVNLKITNLDILKKIKAQNVLPNDDKCDSKTASPNSALTALRR
KIKYLEEKKAKMNDSLSSISDRDSSKCDLESDAESLTALEEEFSRNRSKKVVNPDPEPLH
FDVEVNKWNVNPFRNLDGSISIFVDKLVSPVLMVHTKKNNRIQPVSNMRDIPFGDDIHMV
LKNMGIEKPMRPQTVSWPTIMRGHSFFLIGPYNSGSTMGYLPAVCRLVSDYKNMPNNFGL
SCIIVCATSHSVTNVETVCKMFLHRAKILACFAGMSDLDITTSLLNGCDILICTPTMLVR
LIQEDFSLDLHNLSTFVVDDCERVSKVYTKELKFCLLKVMDIVKSRANKEWKVQYVIVSR
VWCDFMSTLARKAPDSVICISAFEECVPYTKVPTSVEFVKQENKVEAVINFLKDIDRSKM
SVIVCRTDDEVKLLVNTLTKLKYVVFSSDSTMTVQDLYNLDKALKDYEEPVSGPVLVCLD
GNLTHLNVTNAVYLIHYSLPSLYSMFCKRFAVLIDNYPSVFKDEETKIKIKILLDDTNIE
QLPKILHFIKRCTNNVSPVLNEISSTVLSEKNLKKAQNFVPICKKLLSLGKCPDFWNCME
RHAIFKDYDTPKAWMPKEGTIIFQILHYHSAIYYSARITSCITKSNTVKYAQTYSLLSFK
MGMYFSKEENRRLYGVPKVGDICAVTLKQNLFARCQIAKVLKTTNNRPTLLLVKLIDEER
YEIARDTWLYCLPDELKGIETHVVTVILANLIPQDKDVTFSKLAEYQLKRITEEKEDLYM
RGQIKMVVGNVILVDTLEACQNLSSLEEVVVYSDFRKELLDNHAMQNPDHIKNLRKICDY
ACEEIKEEPIRIEVPNPIKILPKPRWAHLESGQFSSVFFVDAESPWKFFVRPVKFDSCLN
TLVNDIKQYVNENPEPVENVNVGDIVIAELPGDATYERARIDSEVKNGKVKCFFVDQAES
SEVSVNKILPITEKLITRLPFQAIECRLIGIQPFGDSWTDFSTNFFVDSCFDSLDKHKQL
YTKYFTKEKAEFTEGHKYGVVLIDTYSTEDVIINQMLVDKNLAEENEEFELLHNLGFERK
SEESSDSDIDDAPEQKSVALPPIRPVITSEVNNKPNSMKPSNTIIRSVPLVGSDDDSDEF
ELVSDDKGKLSSIPLAEVVGITELPETEWNDNTLAAPIGETEIKLDNKPILQAENIKTDE
LSKPKLLWCQNNNTVTIKIKIIVDEYDLVIKERYIKFSADANDTKYGFDFELYGVVNLNK
SFHSNKGQYILVKLWKVLASNWLSLTSDVAVKKWIAYDIENIEVTSDEESVILDDRKKML
PEQIDSDSDDNLEDDITFSY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggggctagatcagtataaagtggatgtgctccactacattaatccctacttaatatgg
gtggtagttcacaaagaaggggaggaagataagtttttcttcgaacaaattggaatttat
gggattatgcctcaaaatgtaactattggagatgattgcgtggtgaaaactgagtcttgt
tctacgtggatgccagcatcagttattccaatgaagaaagcattacgagaagccgccgag
gtttggttttctccaacctatatcgacaaaaaaacatccattttcgaagacaatattcac
aagtatggagagctgatagttattcttaaagatggtaaagaggtcaacatactcaatgaa
attgtcgacactggcttcggatttgaagacgagtgtcttttccacaaggaattgcgggac
aaccaacttgatactagactcgactacctaaccatacatgaagtaattaagcaattagaa
gagggctataaatctcgaaaaataccgaaggatatatggctagaagtcttaaaaagccaa
acatttgtactacatgaagctaagatgatagaaaccagtctagcttcacgtaaacttcat
ataactgatggccgtaatgttgaaactgttcttaaaaacaagctgaacgctttgaagctt
tgcaaagatgtagacgaggattccgttggaatagccagcacctttaggagttctagacct
tctagtgtagttagtgtagctatgaaaaagaagttggactggttgcgatcacagaaaatt
gaaaaccgaaaagtacatacggtagatgacagtatcaaaaacaaaagtgattttgatgac
caagttgataatccaaaacctgcaaacaaggttttatttgacggcgatagcaacaataat
catgagaccaagcttgcgtcatcaggcaaaaaacagcggtggcaacctacagaagacaat
ctcatagccattggtccagcaggcctccctttaaataagttttcacgtatgttaaaacct
caaaaggaagaagatttacaagcttctgaaaaaaagaaggcagaagaaagaaagccagaa
attgaagtagaagaagaaaaaaatccagacgtgtatgcaaacacagactctgaggtaaac
ttgaaaataactaatttggatattttaaagaaaattaaagcacaaaatgttttgcctaac
gatgataaatgtgacagtaaaactgctagtccaaatagtgcattgactgcgttgagacgt
aaaattaaatatctcgaagaaaaaaaagctaaaatgaatgacagtctatcttcgatttct
gatagggatagttccaaatgtgatttagagtctgacgctgaaagtttaactgcactagaa
gaggaattcagtcgtaatagatcaaaaaaagttgttaaccctgacccggaaccactacat
tttgatgtagaagtaaataaatggaatgttaacccatttagaaacttagacggtagtatc
tcaatattcgttgacaagttagtcagtcctgttttgatggtacatactaagaaaaataac
cgcatacaaccagttagtaatatgagggatattccttttggggacgatattcatatggta
cttaagaatatgggtattgagaagccgatgagacctcaaacagtttcctggcctaccata
atgcgtgggcacagtttcttcctaatcggtccttataacagtggtagtactatgggctat
ttaccagctgtgtgccggttagtcagcgattacaagaacatgcccaacaatttcggtctg
agctgcatcatagtttgcgcgacctctcactctgtgacaaacgtggaaactgtttgcaaa
atgtttttacacagagcgaagattctcgcttgcttcgctggcatgagtgaccttgatatt
accacctcacttttaaatggatgcgatattctcatctgcactcctactatgctagtccgt
ctgatacaagaagattttagtctcgatcttcataatctatccacttttgtcgtagacgat
tgtgaacgcgtatccaaagtttacacaaaggagcttaagttttgccttcttaaggttatg
gatattgttaaaagccgagctaataaagagtggaaagttcagtatgtaatcgtttcgagg
gtatggtgtgattttatgtccactcttgctaggaaagcaccggattccgtgatatgcatc
agcgcattcgaagagtgtgtcccttatactaaagtacctacttcagtagaatttgttaaa
caagagaataaagtagaggcagttatcaactttttgaaagacattgacaggtcgaagatg
tctgttatagtttgtagaactgacgacgaagttaaattactcgtaaatactttgacgaaa
ttgaagtatgtagtgttctccagtgacagcacaatgacggtgcaagatttgtataattta
gataaagccttgaaagattatgaagaacccgtttctgggcctgttttggtgtgccttgac
gggaatttgacccatctgaacgtaacgaacgctgtctatttgattcattattcattgccc
agtctatattctatgttctgcaaaagatttgctgtattaattgataattatccttccgta
tttaaagacgaagagaccaagataaaaattaaaatattactcgacgatactaatatagaa
caattgccaaagattcttcattttatcaaaagatgtacaaataacgtatcaccagtatta
aatgagattagctcaactgttttatctgaaaaaaatctaaagaaagctcaaaactttgtg
ccaatttgcaaaaaacttttgtcactaggtaaatgtccagatttttggaactgtatggaa
agacatgctatatttaaagattacgatacaccgaaggcttggatgccgaaagaaggtact
attatcttccaaatactgcactatcactcagctatatattattctgctagaataacatct
tgtatcactaaatcgaataccgtaaaatacgcacaaacttatagcttgttgtcgttcaaa
atggggatgtatttcagtaaagaagaaaataggaggctgtacggtgttcctaaagtcgga
gacatatgcgcggttaccttaaaacagaatctgtttgctcgttgccagatcgctaaagta
ttaaaaaccacaaacaacagacctactcttttactagttaaacttatcgacgaagaaagg
tacgaaatagctcgcgacacctggctctactgtttgccagatgagttaaagggtatagaa
acccacgtagttaccgtcatactggctaatcttatacctcaggataaagatgtaactttc
tccaagctagctgagtaccagttaaaaagaatcactgaggaaaaggaagatctctatatg
aggggtcaaataaaaatggtcgttggtaatgtaattttagtagatacactggaagcgtgt
cagaatctgtcgtccttagaagaagtggtagtctattctgattttcgaaaggaactcttg
gataatcacgctatgcaaaatcctgatcatattaaaaatttgcgtaaaatatgtgattat
gcttgtgaagagattaaagaagaacccattcgcattgaagtgccaaatcctattaaaata
ctgcctaaacccagatgggcacatttggagagcggtcaattttcttcagttttctttgtt
gatgctgagagtccttggaaattctttgtgaggccagttaaatttgactcgtgtttaaac
accttagtaaatgatattaagcagtatgttaatgaaaatcccgagcctgtagaaaacgta
aatgttggagacatagttatagctgaactgcccggtgatgccacttatgaaagagctagg
atagatagtgaagttaaaaatggtaaagtcaaatgtttctttgttgatcaagctgaatca
agtgaggtttctgttaataaaatacttccgatcactgaaaaactcattacgcgattaccg
ttccaagctatagaatgtaggttaataggtattcaaccattcggtgatagttggacggac
tttagcaccaacttcttcgtagattcgtgtttcgattcactcgataaacacaaacaattg
tacactaaatatttcactaaagaaaaagctgaatttactgaaggtcacaaatacggcgtt
gtcctaatagacacgtattccacagaagatgttattataaaccagatgttagtcgataaa
aatttggctgaggaaaacgaagaatttgagctgctacacaatttaggttttgaaagaaag
tcagaagaatcgtctgattctgatattgatgacgcaccggagcagaaaagtgtggcttta
cctccaatacggccagtaataacttctgaagtaaataacaaacctaattccatgaaaccc
tcaaacactattattagatcagttccattagtaggatcggatgatgattccgatgaattt
gaactggtttctgatgataaagggaaactatcttctatccctttagccgaagttgtgggc
ataacagaacttcccgaaacggaatggaatgataatactttagctgcccctataggagaa
acagaaattaagctagacaataaacctattttacaagcagaaaatattaagactgacgaa
cttagcaaacccaaattgctttggtgccaaaacaataatacggttacaataaaaatcaaa
ataatagttgatgaatacgaccttgttattaaagagaggtatatcaagttttcagctgac
gcaaatgatacaaaatacggtttcgattttgagttgtatggcgttgtgaatttgaataaa
tcttttcactcaaataaaggtcagtacatactagtgaagctatggaaagtattagcaagt
aactggctgtctttaactagcgatgttgctgtaaaaaaatggatagcttatgacatagag
aacatagaagttacttctgatgaagaatcagttattctagatgacagaaaaaaaatgttg
cctgaacaaattgatagtgacagcgatgataatctggaagatgatattacattttcttat
taa
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