Helicoverpa armigera (cotton bollworm): 126053433
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Entry
126053433 CDS
T05609
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126053433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
126053433
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126053433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_Gbeta
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_HPS5
Tricorn_2nd
Beta-prop_DCAF4
Beta-prop_WDR11_2nd
Beta-prop_WDR41
WD_LRWD1
Beta-prop_ACSF4
Beta-prop_IP5PC_F
Frtz
Motif
Other DBs
NCBI-GeneID:
126053433
NCBI-ProteinID:
XP_021189184
LinkDB
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Position
18:complement(4930982..4933564)
Genome browser
AA seq
860 aa
AA seq
DB search
MDFGHPPPNLGMPPPGMGMGMGMGPPMGPPGRNNIRHNFRPFNYQMRFPPQGPLNMTQDD
FDGKRLRKSVMRKTVDYNAAIIKALECRVWQRDWRDRHALQPDAMYTPDLLPPPSYPDNP
INAVTTRFVKTATNKMRCPIFAVAWTPEGRRLITGASSGEFTLWNGLTFNFETILQAHDS
PVRSMVWSHGEGWMVTGDHSGFIKYWQSNMNNVKMYQAHKEAVRGISFSPSDSKIVTCSD
DGTLRIFDFYRCQEERILRGHGADVKCVQWHPTKALIVSGSKDNQQPIKLWDPKSGTALS
TLHAHKSTVMDLKWNDNGNWLITASRDHLLKLFDIRKLGTELQIFRGHKKEASSVVWHPT
HEGLFCSGGSDGAILFWNVGTDKEVGCIEGAHESIVWTMAWHPLGHILCSGSNDHTSKFW
TRNRPGDLMRDKYNLNTLPPGVQDDHDLEEPAIIPGMGPEDKVEIFSSDTDKVIPGLDLD
TTFVPMEFEKKVKKVPYSKPIPRNFQAQWNHGPTNDDAATEALTQALVESVPGAIPLQQI
TPSAIFIYGKLIPVEPGSKLEKAISDGPLSLKKYIASGEIEELHDVMPHLEDDADDDNYQ
PFEYPEPGNENDNPDEENNEQENYDNYDQDNEYYDNEMDVSEQNNQGDEQGFNNGPPEMN
NMGSMNNMPPPMSNMMRPPMPMGNMGPMGPRPPMGPMHPMGPMHMPPPHIANMMGNMPPM
GNMPPMGNMPPMGNMPARPPFPDNGFNKPHFDSGYDNQQYSQNDEDYNEDESSYDQNYDD
DGYNNDDNGDDGYNNNNMRNQRWEGGYRGRGQGRGRGRGINGHGGRNNWRGNSGSRGTSR
GRRGGGANRSFRRGGKPVPN
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatttcggacaccctccgccgaatttggggatgcctcctcctggcatgggtatgggc
atgggcatgggaccacccatgggtccgcccggtagaaacaacattcgtcataattttaga
ccgttcaactaccagatgcggtttccacctcaagggccactgaacatgactcaagatgat
ttcgatggtaaacgcttacgtaaatccgttatgcgaaaaactgtagattataatgctgct
attataaaagctttagaatgtcgcgtttggcagagggactggcgggacaggcacgcgctg
caacccgacgctatgtatacacctgatctgttaccgccaccctcttaccccgataaccct
ataaatgctgtcactactcgatttgttaaaactgctaccaacaaaatgagatgtccaatt
tttgcggtggcttggacgccggagggtcgtcgtttgatcactggggcttcatctggagaa
ttcacactatggaatgggttaacatttaactttgaaacaattctacaagctcatgattcc
cctgtgaggtcaatggtttggtcccacggtgaaggctggatggtaactggtgatcattca
ggatttatcaaatattggcaaagcaatatgaacaatgttaaaatgtatcaggcacataaa
gaagctgttagaggtattagtttcagtcctagcgattctaaaattgttacatgttctgac
gatggcacattgcgaatatttgatttctatagatgtcaagaagaaagaatattgagaggt
catggtgctgatgttaaatgtgtacaatggcatcccaccaaagcactcattgtgtcaggg
agcaaagacaatcaacaaccaataaaattatgggaccccaaatctgggacagctttgtcc
actctgcatgcacataagtctacagtaatggatctgaaatggaatgataatggcaattgg
ctcataacagcatctcgtgaccatttacttaaattatttgatatccgtaaattaggaaca
gagctacaaatatttagaggtcataagaaagaagcctctagtgtagtttggcatcctact
catgagggtttgttttgctcaggtggttctgatggagctatcttattctggaacgtgggt
actgataaggaagtaggttgtattgaaggagctcatgaatctattgtctggacaatggcc
tggcaccctcttggtcacatattatgctcaggatctaatgaccatacatcaaagttttgg
actcgaaaccgtcctggagatcttatgagagacaaatataacctcaacacattaccacca
ggagttcaggatgaccatgacttagaagaaccagcaattatacctggcatgggtcctgag
gataaggttgaaatattctcctctgatactgataaggtcattccaggtttggatttggac
accacttttgttccaatggagtttgagaaaaaggtgaaaaaggtaccatacagtaaacca
atacctagaaacttccaagcacagtggaatcatgggcctactaatgatgatgctgctact
gaagcattgactcaagcattagttgaatctgtgccaggtgctatacccctgcagcaaata
acaccatcagctatatttatttatgggaaacttattccagtagaacctggttccaaactg
gagaaggctatatctgatggtcctttatcattgaaaaagtacatagcttcaggagaaata
gaagaacttcatgatgtgatgcctcatttagaagatgatgctgatgacgataattaccaa
ccatttgaataccctgaacctggaaatgaaaatgacaatcctgatgaagaaaataatgaa
caggaaaactatgataattatgatcaagataatgaatattatgataatgaaatggatgtg
agtgaacaaaacaatcaaggcgatgaacaaggttttaacaatgggcctcctgaaatgaat
aatatgggatctatgaacaatatgcctccaccaatgagcaacatgatgcgtccacctatg
ccaatgggaaatatgggtccaatgggtcctcgtccaccaatgggacctatgcatcctatg
ggtccaatgcatatgccgccgccacacattgccaatatgatgggtaatatgcctcccatg
ggtaacatgccacccatgggcaacatgccaccaatgggtaatatgccagcacgtccacct
tttcccgataatggatttaataaaccgcacttcgactctgggtatgataatcaacaatac
tcacaaaatgatgaggattacaatgaagatgaatcatcctatgatcaaaactatgatgac
gatggttataataatgacgacaatggagacgatggatacaataacaacaatatgcggaat
cagagatgggagggtggctatagagggcgcgggcaagggcgtggcagaggtcgcggcata
aacggccatggtgggcgaaacaactggaggggtaacagcggctcgcgaggcacttccaga
ggtcgccgcggcggcggtgccaacaggagctttagaagaggcggcaaacccgtacccaac
tag
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integrated database retrieval system
