KEGG   Helicoverpa armigera (cotton bollworm): 126055065
Entry
126055065         CDS       T05609                                 
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
  KO
K14409  protein SMG7
Organism
haw  Helicoverpa armigera (cotton bollworm)
Pathway
haw03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:haw00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    126055065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:haw03019]
    126055065
Messenger RNA biogenesis [BR:haw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     126055065
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     126055065
SSDB
Motif
Pfam: EST1_DNA_bind EST1 RPN13_C
Other DBs
NCBI-GeneID: 126055065
NCBI-ProteinID: XP_063891020
LinkDB
Position
5:join(12601184..12601215,12601475..12601574,12602072..12602197,12602982..12603100,12603542..12603715,12603918..12604103,12605636..12605773,12606887..12606980,12607394..12607580,12608018..12608158,12608528..12608684,12609138..12609269,12609954..12610156,12610317..12610411,12612370..12612480,12612865..12614118,12614317..12614412,12614629..12614709)
AA seq 1141 aa
MVLNAAVQMLREADELKQKISKFKSGTSMLQERGLWATQQQLQKVYQKVLVLDLDYALDK
KVEQDLWNVGFKQQIEALQAISKDRKNPLRSEGQAMLSWVLQAAAGFYLCLLHQICTTFK
LDLPFRRRASLLGLVEGWGAGETAVGARLPPPASARYICQHCLVHLGDLARYRQQLRVAH
TFYRHALVVSAHSGQPYNQLALVAWRRGRRLGALYWHVRSLLVRAPFPPAPANLARTLRA
AAAPQGEPVLPVIPGVTEGTGPAPAAPAARLDAHSYVTELIRAMHYIHTVEELDAAAALV
NSLNSSLTALIATDSFESMTLMKMACVMIWLVHSTTEDLTLDNSALSAGEQRAARLSSAL
ATGTLLALLLPHYTVDEPLQRALPALKVWLSWAAWHPRVLGCSAWVSLAALWPALAHSLN
MLAPAAALLTDTYDSVPLPEDEELAGFLPLEGALKGLRFPNHAAWDTYGGRVPDMDDEAD
DNDNDSVPPAEVPVTCLSSPELQQRVRAHRLLQLGVKLAQLRPEHLSYTEEDGKLTFTAS
SMGGEQLSQALAALRVAAGAGAERGGGAPEPEDESDDEPAHPPPPIVISEADFREKVREK
RVGILKPQGSLERAREERALATQDDQLTEVDVCEDSKCEDKKERKPRVNIAMAAIMRKQE
ETNKQVKFVTPPPTPDSIADSTESKDDKPKVIQPKAIKSLANIPVGRKTGGILSLKDKSA
GYPHLVLNTEPEPTKKLEKDEKKDVKLSQSSQNSQSYQQKRLEHPTSPNWNPIQNPYPDA
PRMNFQKNYGIQNAGLSYNPSYPAPNVNNQGIRLPVVNPKEIDVRTAALQKQNSRQELFQ
DGQKFNHNYQMSGDKKNFLNDLPPRFANQYRYWQTQDNQFDNKFRDDSAKPALFPTQTRP
WPTPEVYQQPPNWWKPDQPNNVNANFQQPLQPNFYSQHLNTNIPNPYQNLSYNQLQNNIP
QNKQESFNQPGYLQSAIGQPQLQTLQNLVTSPNFNSSLNSFSYAPPVTYDSAMYPQFGNK
LSYQPLQMKMDKPLGYQGKELMDMGALGFGGNPLDMQQRNLNMNFNEPLNNDIGSMKTVD
QVGSVEAGAGAGSTYSLFSAAPDAAAWPPHSQPPPSLWSGPGPSPLERLLEQQKQMKPAP
Q
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggttttaaacgccgctgtgcagatgttgagggaggcagatgagctgaaacagaaaata
tcaaaattcaagagtggaacatctatgttacaagaacgaggtctttgggccacacaacaa
cagttgcaaaaggtgtatcaaaaagtactagttttggacctagactatgcattggacaag
aaagtggaacaggacttgtggaatgtgggcttcaagcagcagattgaggccctccaggct
atttctaaggatagaaagaatcccctccgcagtgaagggcaggccatgctgtcatgggtg
ctccaagctgcagccggattctacctgtgtttactgcaccagatctgcactacattcaaa
ttggatttgccatttagacggcgggcatcgctcctgggtctcgtagaaggctggggcgcc
ggtgagacggcagtaggagcgcgcttaccgccgcctgcgtctgcgcgctacatctgtcag
cactgcctcgtgcatctcggtgatctggccagatacaggcaacagctgcgcgtcgctcat
acgttttacagacacgcgctagtggtgtcggcgcactcggggcagccgtacaaccagctg
gcgctggtggcgtggcggcgcgggcggcggctgggcgcgctgtactggcacgtgcgctcc
ctgctcgtgcgcgcgcccttcccgcccgcccccgccaacctcgcgcggaccctgcgcgct
gccgccgcgccacagggtgagcccgtcctgcccgtgatcccgggcgtgacggaaggcacg
gggccggcgcccgccgcgcccgccgcgcggctcgacgcacactcgtacgtcaccgagctc
attcgcgccatgcactatatacatactgttgaagaattggacgcggcggcggcgttggtg
aattctctcaactcttcgctgactgcgctcatcgcgaccgacagcttcgagtccatgaca
ctcatgaagatggcgtgtgtaatgatctggctggtacactcgacgacagaagacttaaca
ctggacaacagcgccttgtctgcgggggaacagcgcgcagctcggctcagtagcgcgctg
gctactggcacattgctggcgctgttgctgcctcattatacggtggatgagccgctgcag
agagcattgcctgcactgaaggtgtggctgtcctgggcggcgtggcacccgcgggtgctg
ggctgcagcgcgtgggtgtcgctggcggcgctgtggccggcgctggcgcactcgctcaac
atgctggcgcccgccgccgcgctgctcactgatacctacgacagcgtccccctgccggaa
gacgaggagctagcggggttcctgccgctagagggagctctgaagggcttgcgcttcccc
aaccacgccgcctgggacacgtacgggggacgagtgcccgacatggacgacgaggctgat
gataatgataatgacagcgtacctccggcggaggtgccggtgacatgcctgagctcgccc
gagctgcagcagcgcgtgcgagcgcatcgcctgctgcagctcggcgtcaagctggcgcag
ctcaggcctgaacatctgtcttatactgaagaagacggcaagctaacattcacggcctcc
tcaatgggaggcgagcagctatcccaggctctcgcggcgctgcgcgtggcggcgggcgcg
ggcgccgagcgcgggggcggagcacccgagccggaggacgagagcgatgacgagcccgca
catccgccgccgcctattgttatatccgaggctgattttagagagaaagtccgcgagaag
cgcgtgggtatcctgaagccgcagggctcgctggagcgggcgcgggaggagagagcactc
gccacgcaggacgatcaactcactgaggtggacgtgtgcgaggacagcaagtgcgaggac
aagaaggagcgcaagccgcgcgtcaacatcgccatggccgccatcatgcgcaagcaggag
gagaccaacaaacaggtgaaattcgtaacaccgccaccgacaccagattccatagccgac
agcacagaatccaaggatgataagcccaaagtcatacagccaaaagccatcaagtctctc
gccaacatacctgtaggcaggaagacaggcgggatcctctctctcaaagacaaatcggct
ggctacccacacctcgtactcaatacagaacccgaaccaaccaaaaagttggaaaaagac
gaaaagaaagatgtcaaactcagtcagtccagtcagaactcacaaagctaccagcaaaaa
agactggaacacccaacgtcacccaactggaatccaatacagaatccttacccagacgcg
cccaggatgaacttccagaagaattatggaatccagaacgctgggctgagttacaacccg
agttacccagcacccaatgtgaacaaccagggtattagattaccagttgtgaaccccaaa
gagattgatgtcagaacagctgccttacagaagcagaattctcgccaagagttgttccag
gacggacagaagttcaaccataattaccaaatgtccggtgacaagaaaaactttttgaac
gacttaccaccgcgctttgccaaccagtacagatactggcagactcaagataaccagttt
gataataagttccgtgatgacagtgcgaaacccgcgttgtttccaacacagacacgcccc
tggcccacgcctgaggtctaccagcaaccccctaactggtggaaacctgatcaaccaaac
aacgttaacgcgaacttccaacagcctttgcaacctaacttttattcgcaacatttgaac
actaatatacccaacccttaccagaacctatcatacaatcaactacagaacaacatacca
caaaataagcaagaatctttcaaccagcctggttaccttcaatcagctattggccagcct
caattacagactctacagaacttagtaacatcgcccaatttcaattcttccctaaacagc
ttttcatacgcgcccccagtcacatacgactcggccatgtacccacaatttggcaataag
ctgagttaccagcctctacagatgaagatggataagccactgggttaccagggtaaggag
ttgatggatatgggagcgctagggttcggaggaaacccgcttgatatgcagcagaggaac
ttgaatatgaacttcaatgaaccgctcaataatgatatcgggagtatgaagactgtggat
caagttgggagtgtggaggcaggcgcgggcgcaggcagcacgtactcgctgttcagcgcg
gcgcccgacgccgccgcctggccgccgcactcgcaaccgccgccgtcgctatggtcgggt
ccggggccttcgcctctggagcgcctgctggagcaacagaagcagatgaagccggcgccg
caatga

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