Helicoverpa armigera (cotton bollworm): 135116547
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Entry
135116547 CDS
T05609
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC135116547
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135116547
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haw03041
]
135116547
03009 Ribosome biogenesis [BR:
haw03009
]
135116547
Enzymes [BR:
haw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135116547
Spliceosome [BR:
haw03041
]
Complex A
U1 snRNP components
U1 related factors
135116547
Complex B
135116547
Ribosome biogenesis [BR:
haw03009
]
Eukaryotic type
Pre-60S particles
Helicases
135116547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
SAM_DrpA
Motif
Other DBs
NCBI-GeneID:
135116547
NCBI-ProteinID:
XP_063893115
LinkDB
All DBs
Position
11:join(6052094..6052128,6054318..6055754,6055828..6056056,6056145..6056303,6056394..6056723,6056831..6056977,6057055..6057185)
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AA seq
822 aa
AA seq
DB search
MQYNGFHNQHPIFRPRPDRNEQFGKIPFFNGMDFGGPKNFGPRNMGNKPNFRPRNDFNGM
RNEFNHKNENGGNQGDFGGPKDFNKMKNNYNNQPLKKNDYEADKAVGGNMQFYNNGKNDF
GGPKQGFPKNNYGPKNFNNQNGQQNFGPKKVFNPNNMQQNVDFNGKQRGKKTKHPGDSLV
KPMWDLSQLEPIQKDFYKPHANVEGRSDEEVQKFRVSKEITVSGNNVPRPNQVFDEGNFP
DHIISTIKEQGYAEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPXAVHISHQQRI
QRGDGPIALILAPTRELAQQIQSVAQSYSARGTIRNTCLFGGSPKGPQARDLERGVEIVI
ATPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATW
PKEIQALAEDFLNDYVKVNIGSLNLSANNNIKQIIEVCEEHEKEIKLTNLLKEISQERDN
KVIVFVETKKKVDDIARAVRRRGHNALAIHGDKSQIERDAVLTEFRNGVNSILIATDVAA
RGLDVEDVKFVINFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTTGDARQARGLLAVLRE
TGQNPPTKLNDMARSNNNNSGRNRWQQRKENNSGASSPRQQNNQWNNKMANTNPEESQNT
YQNRGGNPQAPRFSNQNQGNQGYRQNNYQKQVPFPSPNVFESMGNYQGGYNNGYQNGYNG
QNGYGQRPYNNMRNGGQQYRNNNAGNKNNGTGSSYGSPPPHFATPQHYPQMHPHHQEMLG
GKFYGGGVGGGGPCGYQAAVGVSGPYAHLPPGSLLYAAPVQQ
NT seq
2468 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacggattccacaaccagcatccgattttcagacctcgaccagaccggaat
gaacaattcggtaaaattccatttttcaatggaatggactttgggggccctaaaaatttt
gggccaagaaacatgggaaacaaacccaattttcggcccagaaacgattttaatggaatg
aggaatgaattcaatcacaaaaatgaaaatggtggaaaccagggcgattttggtgggcct
aaagatttcaacaagatgaaaaataattataataaccagcccctaaagaaaaatgattat
gaggcagataaggcagtaggtggaaatatgcagttttataacaatggcaaaaatgatttt
ggtggaccgaaacaaggtttcccaaaaaacaattatggtcccaagaatttcaataatcaa
aatggacagcaaaactttgggcccaaaaaagttttcaatcccaacaatatgcaacaaaat
gttgattttaatgggaagcagaggggaaaaaagaccaaacaccctggtgatagcttggta
aagccaatgtgggatttatcacaacttgagcctatccagaaagacttttacaagccacat
gctaatgtagagggtcgctcagatgaagaagtgcaaaaattcagagtttcaaaggaaata
actgtcagtggcaacaatgttccccgccctaatcaagtctttgatgaaggaaatttccct
gatcacataattagtacgatcaaggaacaagggtatgctgagccaacaggtatccaggct
cagggatggccaattgccctgtctggtcgtgatatggtaggcatagcatccactggttcg
ggtaaaactcttgcatacatgttaccgctgctgttcatatcagccatcaacagcgtattc
agcgaggggatggccctattgcgcttattctggctcctaccagggaattggctcagcaaa
ttcaatctgttgctcagagttatagtgctcgtggcactattagaaacacttgtctgtttg
gaggctcacctaagggaccacaagcaagggacttggaaagaggtgtagagatagtgattg
caacacctggacgattgatcgatttcttggaacgcggcacaactaacttgcgtcgctgca
cttacttagttttggatgaagccgatagaatgttggacatgggtttcgaaccacaaatcc
ggaagatcattgaacagattcgcccagatcgtcaagttctcatgtggtccgctacatggc
ctaaagaaattcaagctcttgctgaagacttccttaatgattatgtaaaagtaaatattg
gttcattgaatctgtctgccaacaataatattaaacaaataattgaagtttgcgaagagc
acgaaaaagagattaaattgactaacttactgaaagagatttcccaagagagagataaca
aggtcatagtttttgtggaaactaagaaaaaggtggatgatattgctcgtgctgtacgtc
gcaggggccacaatgctcttgctatacacggtgacaagtcgcaaattgagcgcgatgcag
tgttgaccgaattcaggaatggagtcaatagcatcctgattgccacggacgttgcagccc
gcggtctcgatgtcgaagacgtcaaatttgtcataaactttgattacccaaattcgtctg
aggattacattcatagaattggtcgaactgggcgttgtcaacaatctggaacagcttata
cctacttcacaactggagatgctcgtcaggctcgcggcttacttgctgtcctacgagaaa
ctggccagaatccaccaacaaaattaaacgatatggctcgcagcaacaacaacaactctg
gtcgtaaccgttggcaacaacgcaaagaaaataacagtggtgccagctcgccgcgtcaac
aaaataaccagtggaataacaaaatggccaacacaaatcctgaagaaagccagaacactt
accaaaaccgtggcggtaatcctcaagctcctcgattctcaaaccaaaaccaaggaaatc
aaggataccggcaaaataactatcaaaagcaggtgcccttccctagccccaatgtttttg
aatctatgggcaattaccagggtggatacaataatggatatcaaaatggatacaatggac
aaaacggatatggtcaacgcccatacaataatatgcgcaatggtgggcagcagtatcgca
acaataatgctggcaacaagaacaatggcactggctcatcttatggatctcctcctccac
actttgctaccccacagcattaccctcagatgcatcctcatcatcaggagatgctaggcg
gcaaattttacggcggcggtgttggtggcggtggaccctgcggttaccaagctgcagtgg
gtgtaagcgggccttacgcacacctgcctcctggctccctgctttacgcggctccagtgc
agcagtaa
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