Helicoverpa armigera (cotton bollworm): 135117124
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Entry
135117124 CDS
T05609
Name
(RefSeq) exosome complex component MTR3-like
KO
K12587
exosome complex component MTR3
Organism
haw
Helicoverpa armigera (cotton bollworm)
Pathway
haw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135117124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haw03019
]
135117124
Messenger RNA biogenesis [BR:
haw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
135117124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
135117124
NCBI-ProteinID:
XP_063891647
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Position
7:complement(1242634..1243557)
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AA seq
307 aa
AA seq
DB search
MPLDYRRFNGPEDSVSYKRFTKDHSKTYDELYKELLDDNGVRKDGRALAEARSMFARTDM
VSQAKGSAYVELRKTKVVCSVFDPREIPHQNEFSQLGQIFCEVKFAPFSCPRKRRQHQPD
AEEKALSVALRKALEPTVCRHMFPNYQVDVFIYILEHDGACLPAAINAAGLALADAAVPM
YDVITSCSIAVIGDKMFVDPTENEEHLVLLSPQTATNHGIVTLSMLSELKQISDFTVVGS
MDVECISKAMTILEKECGKLVPLIQKVLVANVLKCIEQRKRLEEEANEREQALNAKMEEW
KRLLNAG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggattaccgaagatttaatggacccgaagatagtgtgtcatacaaacgtttt
actaaggaccattcaaagacttatgatgaactttacaaagagttgctagatgataacgga
gttcgaaaagacggccgcgctttggccgaggctcgtagcatgtttgctagaaccgatatg
gtttctcaagcaaagggatcagcgtacgtagaattgagaaaaacaaaagtggtttgttcc
gtgtttgacccgcgagaaatcccccaccaaaatgagtttagtcaacttggccaaatattc
tgtgaggtgaaattcgcgccattttcttgccctcgcaaacggcgccaacaccagcctgac
gctgaagagaaagctttgtctgtggcactcaggaaagccctggagcccacagtctgtaga
cacatgttccctaactatcaggttgatgtgttcatatacattctggagcatgacggagca
tgcttacctgcagcaatcaacgcagctggccttgcattagccgatgcagcggtcccaatg
tatgatgtaataacatcttgttctatcgcagtcatcggcgacaagatgttcgtggaccca
acagaaaatgaagaacatctagtcttattaagcccacagactgctaccaatcatggtatt
gtcacattgtctatgctgtcagaattgaagcaaatatcggacttcacggtagtcggctct
atggatgtggaatgtatttctaaagctatgactattctagaaaaagaatgtgggaagctt
gtacctctgatacagaaggtgcttgtagctaatgttttaaagtgtattgaacaacgaaag
aggttggaggaggaagccaacgagagagaacaggctttaaacgccaagatggaggagtgg
aaaagattattaaatgctggatga
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