Halobacteriovorax sp. BALOs_7: BALOs_0103
Help
Entry
BALOs_0103 CDS
T05649
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
hax
Halobacteriovorax sp. BALOs_7
Pathway
hax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BALOs_0103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hax03019
]
BALOs_0103
Messenger RNA biogenesis [BR:
hax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BALOs_0103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Big_11
Anti-Pycsar_Apyc1
Lactamase_B_6
ODP
Motif
Other DBs
NCBI-ProteinID:
AYF43124
LinkDB
All DBs
Position
complement(106697..108304)
Genome browser
AA seq
535 aa
AA seq
DB search
MSKLTISPLGGVGQIGSNATLISYEETNIIIDAGILFPSEDCFDINYLIPDLSDVKLKIS
NIIISHGHEDHIGAISHYIEKFPEAQIHAPKFAKELIEDKLNYLDLSKKIHRLDDTLIID
KIEINAVHVNHSIPNTKGLHLGIKEIDTGILFISDFKSDFNCPYEGPIDLEQMKSLARKY
TNRISMLDSTNITSSTLRTTSESELKSDLSKFIKDAPGRVFITCFASNIHRIQTIFDIAK
EQNLKVITYGRSLLKYTRIASECEIFDDHGLIREVESVQDLSKKQIIICSGSQGEFRGTV
KRISSGNDKFFKVNEKDTFIFSSKAIPGNEKKLAFLYNELTSSGAEVITNANGLIHASGH
PGKEDLKDVYEAYLPTIAIPIHGETYFIRKHIEFLNTILPKSKALEIANRDVVTIFANGE
VKLNKTEEVPPILIHGNRIEIEREKISERRKMATLGSVFISIANNSIKKASGRVHITALG
IPYEEDQLNQLKELCFNIYQEKGTLDQRSEKIRIATRRYFQNILGYRPLAIVHIC
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattaacaatctctccacttggtggtgttggacaaattggatcaaatgcaact
ctgatatcttatgaagaaacaaatatcatcattgatgcaggaatcctctttccttcagaa
gattgctttgacattaattatttaatccctgatctctctgacgtaaaattaaaaatttca
aatattattatttcacatggacacgaggatcacattggtgcgatttctcactatatagaa
aaatttcctgaggcccaaatacacgcaccaaaatttgccaaagaattgattgaagataag
ttaaattatctcgatctctcaaaaaaaatccatcgtttagatgacacattaattattgat
aaaatagaaataaatgcagtccacgtaaatcactctattccaaatacaaaaggactacat
ctgggaataaaagagatcgatactggcattctttttatttctgattttaaaagtgacttc
aactgcccatacgaaggtcctattgatctcgagcaaatgaaatcactagcaagaaagtat
accaatagaatttcaatgcttgattctacaaatataacgagctcaaccttaagaacgact
tcagaatctgagttaaaaagcgatctttctaagtttataaaagatgcgccaggaagagtc
tttatcacctgctttgcttcaaacattcatcgtattcaaacaatatttgatatcgccaaa
gaacagaatcttaaagttatcacttatggccgatcattattaaaatacactcgaattgct
agtgaatgtgagatatttgatgatcatggacttattagagaagtagaaagcgtacaagac
ctctcaaagaaacagattataatctgctcaggtagccaaggtgagtttagaggtactgtt
aaacgaatctcaagtggtaacgataagttttttaaagtgaatgaaaaagatacattcatt
ttcagttcaaaagcaattcctggaaatgaaaagaaacttgcatttctttataacgaacta
acaagttctggtgcagaagttatcactaatgccaatggtttaattcacgcctctggtcac
cctggaaaagaagacttaaaagacgtttacgaagcatatctgccaacgatcgcaatcccc
attcacggtgaaacttattttataagaaagcatattgaatttttaaatacgattcttcca
aaatctaaagctcttgagattgctaatcgtgatgttgtaacgatatttgcaaatggagaa
gttaaacttaataaaactgaagaagtaccaccaatattaattcatggtaatcgaattgaa
atcgagcgcgaaaaaatctcagaaagaagaaagatggcaaccctaggctctgtctttatt
tcaattgctaataacagtataaagaaagcaagcggaagagttcatatcacggcacttgga
ataccatacgaagaagatcaacttaaccaacttaaagaattatgctttaacatctatcaa
gaaaaaggcactctcgatcaacgatcagagaaaatcaggattgcgacacgtcggtatttt
caaaatattctaggatataggcctctggccattgttcatatttgttaa
DBGET
integrated database retrieval system
