Halobacteriovorax sp. BALOs_7: BALOs_1487
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Entry
BALOs_1487 CDS
T05649
Name
(GenBank) putative alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
hax
Halobacteriovorax sp. BALOs_7
Brite
KEGG Orthology (KO) [BR:
hax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hax03021
]
BALOs_1487
Transcription machinery [BR:
hax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BALOs_1487
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
KORA
Motif
Other DBs
NCBI-ProteinID:
AYF44488
UniProt:
A0AAD0T4G2
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All DBs
Position
1516154..1517233
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AA seq
359 aa
AA seq
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MSDSKKNKNKYLEDSDKSEKKDFDYEILPSIDEKKLKESSDSEENIDDIIDISNLPDSGL
TLEEEIEVIKETLPALTSKLPVPSRVDNKLNQYLKEISRYELLSPEQEKTLIRQFRETGD
IALAKKLVVSNLRLVVKIAMDYKSAHANVMDLIQEGNIGLMKAVSLFEPDKGAKLSYYAS
WWIKSYILKFILDNFKLVKLGTTNEQKKLFYNLMREKERLEAQGIKPDHKTIAQNLDVSE
KAVALMDMRLGDAGSEVSLDIPVGENSSATMGDLLPDSTDVAQDVEFKQSLQLLQENLDQ
FIQGLKPRDQEIFKERLLNDAPRSLQSIADDYGVSRERIRQIEARLLDNLKVYMSEIIR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcaaagaaaaataaaaacaaatatttagaagatagtgataagtccgaaaaa
aaggactttgactacgagattctaccttctatcgatgagaagaagcttaaagaatcttcg
gattctgaagagaatatcgatgatattatcgatattagtaatttacctgattcaggtctt
acgcttgaggaagaaattgaggttatcaaggagacactacctgctttaacttcaaaacta
cctgtcccttcacgagttgataataagctcaatcaatacctaaaagaaatttctcgctac
gagcttctctctccagagcaagagaagactctcatacgacaatttcgtgaaacaggtgat
attgcattagcaaagaagctagttgtctctaatttaaggctagttgtaaaaattgccatg
gattataagagtgcccatgcaaatgtaatggatcttatccaagaaggtaatattggtctt
atgaaggccgtttcattatttgagccagataagggagcaaaactttcatattacgcatcc
tggtggattaagtcatatatcttgaaattcatcctagataactttaagttagtaaaatta
ggtacgacaaatgagcagaagaagctcttttataatctaatgcgtgaaaaagaacgtctt
gaggcccaagggatcaagcctgatcataagacaatcgcgcagaatctagatgtaagtgaa
aaagcagtggccctcatggatatgcgcttaggtgatgctggctccgaagttagtcttgat
atcccagtaggagaaaattctagtgcgacaatgggggatttacttcctgactcaactgat
gttgcgcaagatgttgaatttaaacagtcacttcaacttctccaagaaaacctcgatcaa
tttattcaggggctaaagcctcgtgatcaagaaatctttaaagaaaggttattgaatgat
gccccgcgttccctgcagtccatcgctgacgattatggggtctctcgagagcgtattcgc
cagatcgaggcccgtcttctcgataacttaaaggtttacatgagtgaaattataagatag
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