Halobacteriovorax sp. BALOs_7: BALOs_2882
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Entry
BALOs_2882 CDS
T05649
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hax
Halobacteriovorax sp. BALOs_7
Pathway
hax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BALOs_2882 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hax03021
]
BALOs_2882 (rpoA)
03400 DNA repair and recombination proteins [BR:
hax03400
]
BALOs_2882 (rpoA)
Enzymes [BR:
hax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BALOs_2882 (rpoA)
Transcription machinery [BR:
hax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BALOs_2882 (rpoA)
DNA repair and recombination proteins [BR:
hax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BALOs_2882 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF2240
Motif
Other DBs
NCBI-ProteinID:
AYF45870
LinkDB
All DBs
Position
complement(3008567..3009580)
Genome browser
AA seq
337 aa
AA seq
DB search
MDTFTAKNWTGMIRPVALEMDNDKLTKTYGKFVAKPLERGYGQTLGNSLRRVLLSSLQGA
AIVAIRIEGVEHEFGTINNVKEEVSEIILNLKEVHFRIKDKEQVTLTLEKSVEGVVTAGD
ISESANVEVLNPDHAICNLSTGGSIKMELLVARGKGYVTALDNKESFDLPIGWVYLDSLF
SPVARVNYTVTNSRVGKRTDFDKLTLEVWTNAGVEPSDAVAYSAKILRDQLAVFLSFEDE
EEITRMEAKPKKQQNTANAALLKPVSELELSVRSANCLQNADIKYIYELVSKTEGEMLRT
KNFGRKSLNEIKEVLSQMGLGLGMKVDSIMQDLKEEN
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtggacacatttacagcaaaaaattggacaggaatgataagaccagtagctttggaaatg
gataacgataagctaactaagacttatggtaagttcgttgctaagccacttgaaagaggt
tatggacaaactcttgggaactcattacgtcgtgtacttctttcatcacttcaaggtgca
gctattgttgcaattagaattgaaggtgttgaacatgaatttggtacaatcaacaacgta
aaagaagaagtttctgagattattctaaaccttaaagaggtacactttagaattaaagat
aaagagcaggtaactctaactcttgagaaatcagttgagggtgttgttactgctggtgat
atttctgaatcagctaacgtagaagttctaaatcctgatcacgctatctgtaacttatct
acaggtggatcaatcaagatggaactacttgttgctagaggaaaaggatatgttactgct
ctagataataaagaatcatttgatcttccaatcggttgggtatatctagattctcttttc
tcaccagttgcacgtgttaactatacagttactaactcacgtgttggtaagagaacagac
tttgataagctgactttagaagtatggactaacgctggtgttgagccatctgatgctgtt
gcatactctgctaagatccttagagatcaattagcagttttcctaagcttcgaagatgaa
gaagaaattacaagaatggaagctaagccaaagaaacaacaaaatacagctaatgcagct
ctattaaaacctgtttctgagcttgaactatctgtaagatctgcaaactgcttgcagaac
gcagatattaagtatatctatgagctagtttctaaaactgaaggtgaaatgctaagaact
aagaactttggtcgtaagtcactaaatgagattaaagaagttttatctcaaatgggactt
ggtctaggtatgaaagttgatagcattatgcaagacctgaaagaagaaaactaa
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