Halomonas sp. XH26: J4377_00630
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Entry
J4377_00630 CDS
T10290
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
haxh Halomonas sp. XH26
Pathway
haxh02020
Two-component system
haxh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4377_00630
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J4377_00630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxh03021
]
J4377_00630
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
haxh02035
]
J4377_00630
Transcription machinery [BR:
haxh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J4377_00630
Bacterial motility proteins [BR:
haxh02035
]
Flagellar system
Flagellar assembly proteins
Stator
J4377_00630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Rv2175c_wHTH
MarR_2
HTH_37
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UTA80047
LinkDB
All DBs
Position
138380..139081
Genome browser
AA seq
233 aa
AA seq
DB search
MYTAQGRIKQSELLTQYMPLVRRQALTLQVRLPASIELDDLIQAGMVGLLEALGRFDATQ
GATFATFASQRIRGAMMDELRTRDWLPRSVRRSARAVDDAVRRLEQQLGRPPEEGEIARD
LDMPLSEYQQLLNDTNSGQLLPFEELVAEGAESAKEEATNLPFEQLLDKQQRQSLIDAID
ALPEREKLLMALYYQEELNLKEVGAVLGVTESRVSQLHSQAISRLRARLYDTT
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtatacagcacaaggcaggattaaacagagcgagctgttaacccaatacatgccactg
gtaagacgtcaggccttaacgctgcaggtaagactacccgcaagtattgagttggatgat
cttattcaagccggcatggtgggcttattagaggcactagggcgttttgatgcgacccag
ggggcaacgttcgccacgtttgcaagtcagcgtattcgcggtgccatgatggatgagctg
cgaacacgtgactggttgccgcgtagtgtacgccgctctgccagagctgtggatgatgcg
gtgcgtcgtcttgagcagcagttagggcgcccgccggaagagggtgaaatcgcgcgtgac
ctggatatgccgcttagtgagtatcagcaattgctcaacgatacgaacagtggccagttg
ttgccctttgaagagctggtggccgaaggggccgagtctgcgaaagaggaagccactaac
ctgcccttcgaacagttgttagataaacagcagcgtcagtcgttaattgatgcgatcgat
gccttacctgaacgtgaaaaactactgatggcgttgtattaccaagaagagctgaacctt
aaagaagtcggggcggtgctgggtgtgactgaatcccgtgtctcccagcttcacagccaa
gcgattagcaggcttcgcgctcgcttatatgacaccacctaa
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