Halomonas sp. XH26: J4377_01170
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Entry
J4377_01170 CDS
T10290
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
J4377_01170 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxh03021
]
J4377_01170 (rpoA)
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_01170 (rpoA)
Enzymes [BR:
haxh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
J4377_01170 (rpoA)
Transcription machinery [BR:
haxh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
J4377_01170 (rpoA)
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
J4377_01170 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
UTA80141
LinkDB
All DBs
Position
247136..248131
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGAAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLSLNKQGPAVVTAGDIALDHS
VEIVNPDHVIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttcttcgtcctcgtgacatcaaggtcgaagaaatcagc
gcacatcatgccaaaatcgttctcgaaccgttcgagcgcggctttggtcacaccctgggg
aatgcacttcgtcgcattctgctttcgtccatgcccggcgctgccgtggtagaggctgaa
attgccggtgtagagcacgaatacagtgcgctcgaaggggtgcaggaagatgtcatcgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
tcgctgaacaagcagggcccagctgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggatcacgtcattgctcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtagcgctgggtcgtggttacgaaccggctgacgctcgtggctctgat
gaagagacacgtgcaattggccgcctgcagctggatgccaccttcagccctgttcgccgt
gtttcctattcggttgaagccgctcgtgttgagcagcgcaccgacctcgataagttaatt
atcgatctggaaaccgacggtacactggatccggaagaggctatccgtcgcagtgcgacc
attctgcaagagcagctggccgccttcgtcgacctggaagctgataaagagcaggaagtc
gaagaggaagaggatcttgttgatcctatcctattgcgccccgtagacgatcttgagttg
acagttcgcagcgctaactgcctaaaagccgagaatatttactacattggtgatcttatc
cagcgcactgaagttgagctgctgaagacaccgaatcttggtaaaaagtctttgaatgaa
atcaaagacgtattggcagcgcgcggcttgtccctcggcatgcggctggaaaattggcca
cccgctagcctgaaggacgacaaggcctccgcgtga
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