Halomonas sp. XH26: J4377_01830
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Entry
J4377_01830 CDS
T10290
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxh03016
]
J4377_01830 (truB)
Enzymes [BR:
haxh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
J4377_01830 (truB)
Transfer RNA biogenesis [BR:
haxh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4377_01830 (truB)
Prokaryotic type
J4377_01830 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UTA80263
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All DBs
Position
390320..391240
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AA seq
306 aa
AA seq
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MARRRRGLPVNGVLLLDKPKGISSNHALQRVRRLFEAQKAGHTGTLDPMATGLLPICLGE
ATKFSAHLLEADKMYRTRVELGVITDTGDAEGTVIERREVPRLTAGDVESVLARFHGEID
QVPPMYSALKHQGKKLYELAREGKHVERAARRVSVYDARLLAFEGTAFEIEVSCSKGTYI
RTLAEDIGHALGCGAHISQLRRLKTGPFTGDAMWTLEGLEALADQATREAELMPADVLVD
HLPSLTVDETAYGRLAHGQSASLAIGVLEPDMLARLYYAETFIGLGVVKGAQEVAPKRLL
STVAIS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgccgtcgcggattgccggttaatggcgtattgctgctggataagcctaag
ggtatttccagcaaccatgcgctgcagcgtgtgcgtcgtctgtttgaggcgcaaaaagcc
ggtcataccggcacgctggaccctatggcaacaggcttgttacctatttgccttggggaa
gctactaagttttccgcgcacctgttagaagccgacaagatgtatcgcacccgtgtagaa
ctgggtgtgattacagacaccggtgatgccgaaggcacggtcattgaacggcgagaggtc
ccccgcttaacggctggggatgtcgagtcagtcctagctcgctttcacggcgagattgac
caagtgccgccgatgtattcggcattgaagcatcaaggcaaaaagctgtatgagcttgcc
cgtgagggtaagcacgttgagcgtgcagcgcggcgagtaagcgtgtatgatgcgcggctg
cttgctttcgagggcactgcctttgagattgaagtcagctgcagcaaaggcacgtatatt
cgcaccttggctgaagatattggtcatgcgctgggctgtggcgcccacattagccagttg
agaaggctcaaaacggggccctttaccggcgatgcaatgtggacactggagggccttgag
gcgctggcagatcaagccacccgcgaggctgaactaatgcctgcggatgtgctggtcgat
catttgccgtcgctgacggtggatgaaacggcttacgggcgtcttgcacacggccaatcg
gctagtttagccattggtgtgcttgagcctgatatgctggcaagactttattacgctgag
acgtttatcggccttggcgttgtaaaaggggcgcaggaagtagctcccaagcggctgtta
agtaccgtcgctatctcgtaa
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