Halomonas sp. XH26: J4377_02545
Help
Entry
J4377_02545 CDS
T10290
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
J4377_02545 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
haxh01007
]
J4377_02545 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxh03016
]
J4377_02545 (lysS)
Enzymes [BR:
haxh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
J4377_02545 (lysS)
Amino acid related enzymes [BR:
haxh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
J4377_02545 (lysS)
Transfer RNA biogenesis [BR:
haxh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
J4377_02545 (lysS)
Prokaryotic type
Other AARSs
J4377_02545 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
UTA80386
LinkDB
All DBs
Position
547456..548970
Genome browser
AA seq
504 aa
AA seq
DB search
MANQDASSLDNENHLIAERRAKLAARRERAAEQGKSAFPNDFRRDSLTVELHNLLGEKDK
AELETLDHQASVAGRVMRKRGPFIVIQDVAGQIQLYVDKKGLPADVLEDIKGWDIGDIVA
ARGPVHKSGKGDLYVMMVEAQLLTKSLRPLPDKFHGLTDQEARYRQRYVDLIMNPQSRKV
FETRAAVISSMRRFFEARGFMEVETPMLQPIPGGAAARPFITHHNALDIDMYLRIAPELY
LKRLVVGGFEKVFEINRNFRNEGLSTRHNPEFTMVEFYWAYADYRDLLDMTEAMLRTAAQ
EVLGTTTIEYQGASYDFGKPFQRLTLRQAILDHGDGITDADLDTLEAAQAVAEKLGIKVK
ESWGLGKVQTEIFEEVAEHKLDQPTFITEYPAEVSPLARRNDANPFVTDRFEFFVGGREI
ANGFSELNDAEDQAERFREQAAEKDAGDLEAMYFDADYVRALEYGLPPTAGEGIGIDRLV
MLFTDSPSIRDVLLFPAMRPEASE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctaaccaagacgcgtcttctctcgataacgaaaaccacctaatcgccgagcgccgt
gccaagctcgcggctcgccgtgagcgcgccgctgagcaaggtaagagcgctttcccgaac
gattttcgccgtgacagcctcacggttgagctacacaacctgctgggcgaaaaggataaa
gcggagcttgaaacgcttgatcatcaagcatcggtggctggtcgcgtcatgcgtaagcgt
ggcccgtttatcgtgatccaagatgtggccggccaaatccagctctacgtagataaaaag
ggcttgcctgctgacgtgcttgaggacatcaaagggtgggatatcggtgatatcgtcgct
gcccgtggcccagtacacaagtcgggtaagggcgacctgtacgtgatgatggtagaagcg
cagctgttgaccaagagcctgcgtccactgccggataagttccacggcctgaccgatcag
gaagcgcgttatcgccagcgctacgtagacctgatcatgaacccgcagtcgcgtaaggta
tttgaaactcgcgcggcggtaatcagctccatgcgccgcttctttgaagctcgcggcttt
atggaagttgaaacgccgatgctgcagccgatccccggcggtgcggcagcgcggccattt
attactcaccataatgcgctggatattgatatgtatctgcgtattgcaccagagctttac
ctcaagcgtctggtggtgggtggtttcgagaaggtttttgaaatcaaccgtaatttccgt
aacgaagggttatctacgcgacataaccctgagttcaccatggtcgaattctattgggcc
tacgcggattatcgtgatctgctcgatatgaccgaagccatgctgcgcacggcggcccaa
gaagtgctgggcaccacgacgatcgagtaccaaggcgctagctatgacttcgggaagccg
ttccaacgcctaacactacgccaagcgattcttgatcatggcgacggcatcaccgatgcg
gatttggatacgctggaagccgcacaagcggttgcagaaaagctgggcattaaagtgaag
gagagctgggggctgggtaaagttcagaccgagatcttcgaagaagtggccgagcacaag
ctggaccagccgacgttcattactgaataccccgcagaagttagcccgctggcgcgtcgt
aacgatgctaacccgtttgttaccgaccgttttgagttctttgtcggtggccgagaaatt
gccaacggcttctcggagcttaatgacgccgaagatcaggctgaacgcttccgcgaacag
gccgccgaaaaagatgccggtgatctggaagcgatgtattttgacgccgactacgtgcgc
gcgttggagtatggcttaccgccaacggcgggtgaaggaattggtattgaccgtttagta
atgctgtttaccgacagcccctctattcgggacgtactgctgttcccagcgatgcgcccc
gaagccagcgagtaa
DBGET
integrated database retrieval system
