Halomonas sp. XH26: J4377_03895
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Entry
J4377_03895 CDS
T10290
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J4377_03895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_03895
Enzymes [BR:
haxh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
J4377_03895
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
J4377_03895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UTA80633
LinkDB
All DBs
Position
complement(842244..843584)
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AA seq
446 aa
AA seq
DB search
MPDTPQALSVSQLNQRAKQTLERDVGEVWVEGELSNVSRPASGHIYFTLKDDRAQIRCAL
FRQRARFVSAPMRDGDQVKLRGRVSLFEPRGDYQLIADAVQAAGLGELLAAFERLKAQLE
GEGVFANTRPLPFPPRKILILSSASGAAIRDVLAVLAARWPLADVTLIPVPVQGAEAAPA
MISALGLLNRQARLDPDQDVVLITRGGGSLEDLWAFNNEHLARAIFHSRLPVMSAVGHEV
DVTLADFAADIRAPTPSAAAERLVPDQHALKQQLTQLENRLQRAMQARLERDSQRLDTLR
ARLRHPGEQLERQRQHVTALCQRLQRAMQQTVQQQQVRVTQLSKRLASQDMVRLHRAEQE
RVSQLQHRLASAMQRALEVRQARLSSTARELNAISPLAVLGRGYAIAQDEKGHVIRRAED
TAPGQKLSLRLGEGRLNVEVKRRYKQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatacaccacaagcgctttctgttagtcaattgaatcagcgcgccaaacagacc
cttgagcgcgatgtgggcgaagtgtgggtagaaggcgagctttccaatgtttcccgcccg
gcgtctgggcatatttacttcaccttgaaggatgaccgcgcgcagattcgctgtgcgctg
tttcgccaacgggcgcgttttgtatcggcaccgatgcgtgatggcgatcaggtaaaactg
cgcggtagggtctcgctgttcgaaccgcgcggcgattatcagttgattgccgacgccgta
caggcggcgggcttgggggaactgctggcggcatttgagcgcctcaaagcgcagttggaa
ggcgaaggcgtgtttgccaatacgcgccccctgccctttcctccccgcaaaattctgatt
ttaagctccgccagcggcgcagccattcgcgatgtgctggcggtactggcggcgcgctgg
ccactggcagatgtcacgctgatcccagtgcctgtacaaggcgccgaggccgcccctgcg
atgatttcggcgctggggttactgaaccgacaggcgcgcttagaccctgaccaggatgtg
gtactgatcacccgcggcggcggtagcttagaagacctttgggcgtttaataacgagcat
ctggcacgggcgatttttcactcccgcttgccagtgatgtcggcggtgggtcatgaagtg
gatgtcaccctggcggatttcgccgccgatatacgcgcccctaccccatcagcagcggcc
gagcgtttagtgcctgaccaacatgcacttaagcagcaattaacacagctagaaaaccgc
ttacagcgtgccatgcaggcacgcttagagcgggatagccaacggttggatactttgcgc
gcccgccttcgccacccaggcgagcagcttgagcgtcaacgccagcacgttaccgccctt
tgccaacggctgcagcgcgccatgcagcaaaccgttcagcagcagcaagtgcgggtcacc
cagttaagcaaacgcttagccagccaagacatggtgcgcctgcaccgcgcagagcaagag
cgtgttagtcagttgcagcaccgtttagccagcgctatgcagcgggcgctggaagtgcgt
caggcacgcttgagtagcaccgcccgtgaactaaatgccatcagcccactggcggtattg
gggcgcggctatgccattgcccaggatgaaaagggccatgtcattcgccgggcagaggac
accgcgccaggccagaagctctcgctacggctgggtgaaggcaggctaaacgtggaagta
aaacggcgctacaaacagtag
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