Halomonas sp. XH26: J4377_04335
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Entry
J4377_04335 CDS
T10290
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
haxh Halomonas sp. XH26
Pathway
haxh02020
Two-component system
haxh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
J4377_04335
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4377_04335
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
haxh02022
]
J4377_04335
Two-component system [BR:
haxh02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
J4377_04335
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
Response_reg
HTH_8
AAA_5
AAA
Motif
Other DBs
NCBI-ProteinID:
UTA80718
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Position
complement(943232..944767)
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AA seq
511 aa
AA seq
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MLINVSSHACPINGDMLKSGFVFILAVIDRGSGMGMYSSKQKNQQPIGHTPSDGAIENQA
NAQYLVLIVEDDEDTASLYHAILKLHYHNVKVARNGCEAVSTLVEYQGPAAVILDYQLPD
MTGIDVMTTCRDLDQPTACMVISANDLSAENASCGEIVRLVKPLGCKALLDWTGKLIEKL
QQQLSQSNLNDASPETLLLGESKAMHSLRQQIPLLALSHAPLWLHGESGTGKELVARSIH
YCSPRSNEPFIAVNCAAFPESLIESMLFGHIKGAFSGATRDQKGFFEAADGGTLFLDEIG
DMPLVFQAKLLRALQTGTILPVGSTKPVTVDCRIVSACHRDLSAAVQQGEFREDLYYRLN
VLSIELPPLRERGNDVVLIANRLLSNITSEEHTLPCRLSDSAVSFLTDHAWPGNVRELEN
TLRRAAILHQGVDLHKQHLISSSISYSSKTAPPKPDIMSFGTINTSGKTLKEIEESVIEN
TITEHQGCIESAAKSLGVAPSTLYRRRKKTV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgttaataaatgtctcttcccatgcctgcccaataaatggtgatatgctgaaatcaggg
tttgtatttatcctggcagttatcgataggggctccggcatgggcatgtattcttctaag
caaaaaaatcaacaacctattggacacacacccagcgatggcgctatagaaaatcaagcc
aacgcacaatacctagtgttaattgtagaggacgatgaagatactgcttcgctctaccat
gcgatattgaaacttcactaccacaacgtaaaagtagcaagaaatggttgtgaagcggtc
tctacgttggtggagtaccagggtccagcagcagtaatcttggattatcaattacccgac
atgaccggaatcgatgtcatgaccacctgccgagatcttgaccaacctactgcgtgtatg
gtgatttccgctaacgatctctccgcagaaaatgcgtcctgtggcgagatcgttcgtctt
gtcaaacctctaggatgcaaagcattactggattggactggaaaattgattgaaaagctt
caacagcaattatcacaatccaaccttaacgatgcttcccccgagacattgctgctgggc
gaaagcaaggcgatgcatagtttacgccagcaaattcccttgttggccctctctcatgca
ccgctctggcttcacggagaaagtggtacaggaaaggagttagtcgcccgtagcatccac
tactgcagccctcgctcaaatgaaccattcattgccgttaactgcgctgcttttcctgag
tccctgattgagtccatgttgtttgggcacatcaaaggcgcgtttagcggcgctacacgc
gatcaaaaaggtttttttgaagcggccgatggcggaacactgttcctagacgaaataggc
gatatgccgcttgtgtttcaggcaaaactgctacgagccttgcaaacaggcaccatcttg
cccgttggcagcaccaagccagtgaccgttgattgtcgtattgtcagtgcctgtcaccgt
gatctctctgcggctgtacagcaaggcgagtttagagaagacctgtattaccgactcaat
gtgctcagcattgagcttcctccattaagggaacgaggcaacgatgtcgtcctcatcgcc
aaccgtttgctctctaacattaccagtgaagaacacacgctgccctgtcggctttcagat
agcgcggtcagttttttaaccgaccatgcttggccaggtaatgtaagggaactggaaaac
acgcttagacgggcggcaattcttcaccaaggagtcgatctgcataaacagcatctgatt
tcttcaagcatttcatacagctcaaaaactgccccaccaaaacccgacattatgtctttt
ggcactatcaacacatcaggaaaaacattgaaagaaatagaagaaagcgttattgaaaat
acgattacggagcatcaaggttgcatcgagtcggcagctaaatcattaggcgtagcacct
tctacactgtatagaaggcgtaaaaagacggtgtag
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