Halomonas sp. XH26: J4377_04460
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Entry
J4377_04460 CDS
T10290
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03018
RNA degradation
Brite
Enzymes [BR:
haxh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J4377_04460
Messenger RNA biogenesis [BR:
haxh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4377_04460
Ribosome biogenesis [BR:
haxh03009
]
Prokaryotic type
rRNA helicases
J4377_04460
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Other DBs
NCBI-ProteinID:
UTA80743
LinkDB
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Position
971285..972997
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AA seq
570 aa
AA seq
DB search
MTSTSVASPSFGDLALLPAVLSAVEAQGYEIPSPIQAQTIPALLEGRDMLGQAQTGTGKT
AAFALPLLSRLELTRREPQVLVMAPTRELAQQVAASFSKYGQNLKGLEVAILCGGQEYRE
QLGALKRGAQVIVGTPGRIIDHLDRGSLKLDGLSALVLDEADEMLRMGFIDDVKRVVADT
PKDAQRVFFSATLPTEIERIVNRYLVNPVKVAIESRTTTGENIEQRIVRVDGGAKLEAVA
RILEVEPVDAAIVFVRTRAACTTLVEQLTARGVNAAGLSGDLDQSLRERTITRLKRGKVD
VLIATDVAARGLDVPRITHVINYDLPQDAEAYTHRIGRTGRAGRSGIAITFAGFREGRKV
GWMEQATGQKMTEMPLPDEAAIRAHRDDVFHHRVVAALTKGAEEQRALVERLVEEGHDAV
ELACAFAAMARADEAPIGRLQAPRKERTTRDSAPGGKPGGRRERSSAPSEGMIRYRVSVG
HKDGVKPGQLVGALANEGGIEGARIGRIDIRNAFSVVELPSGLPSTILAKMARARVAGRP
LEISEDSAPERAPRRRRDDGDAPVRRRERA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacttctgtcgcttcgccgagcttcggcgatcttgctctgttgcctgccgtt
ctctctgctgttgaagcacaaggctacgaaattccctcgccgatccaagcgcagacgatt
cctgcgttgctggaaggccgcgatatgctgggccaagcacaaaccggcaccggcaaaacc
gctgcatttgcattgccattgttatcgcgtttagaacttacccgtcgcgagcctcaagta
ctggttatggctccgacccgtgaacttgctcagcaggttgcggcttcattcagtaagtat
ggccaaaacctcaagggtcttgaagtcgctatcctttgtggtggccaagaataccgtgaa
cagttaggcgcgctaaagcgcggtgcccaggttattgttggcacccctggccgtattatc
gaccaccttgatcgcggtagtctgaaactcgacggtctttcggcactcgtgctggatgag
gctgacgaaatgctgcgcatgggctttatcgacgacgtaaaacgcgtggttgccgatacc
cctaaagatgctcagcgtgtgttcttctcggcaacgctgccgactgaaattgaacgcatt
gttaaccgctatctggttaatccggtaaaagtcgcgattgagtcgcgcacgacgaccggt
gaaaacattgaacagcgtattgtacgcgtcgatggtggcgctaagcttgaagcagtggca
cgcatccttgaggttgagccggttgatgccgctattgtcttcgtgcgtactcgtgctgct
tgtaccacgctggttgaacagctgacagcccgtggcgttaatgccgctggcttgtctggc
gatctagaccaaagcctgcgtgagcgcaccattacacgtctcaagcgtggcaaggttgat
gtgctgattgcgaccgacgtcgctgctcgtggtcttgacgttccgcgtattacgcacgtt
atcaactacgatctgccgcaagacgcagaagcctatacccaccgtatcggtcgtaccggt
cgtgcgggccgtagcggtatcgcgattacgttcgctggtttccgtgaaggccgtaaagtg
ggctggatggagcaggctaccggtcagaaaatgactgaaatgccgctgccagacgaagcc
gctattcgcgctcaccgtgatgatgtgttccatcatcgcgttgtagcagccctgaccaaa
ggtgctgaagagcagcgcgcactggttgagcgcctggtagaagaaggccatgatgccgtt
gagctagcttgtgcttttgccgcgatggcacgtgctgacgaagcgccgattggacgcttg
caagcaccgcgtaaagagcgcactacgcgtgatagcgcgcctggtggcaagcccggtggc
cgtcgcgagcgctcaagcgcacctagcgaaggtatgattcgttaccgtgtttctgttggc
cataaagatggcgttaagcctggtcaactggttggtgcactggcgaacgaaggtggcatc
gaaggcgcccgtatcggtcgtattgatatccgcaacgctttctctgtagttgaactaccc
agtggcctgccttccactattctggcgaaaatggcgcgagcccgcgttgctggtcgcccg
ttagaaattagtgaagacagtgcacctgagcgtgctccacgtcgtcgtcgtgatgacggt
gatgcacccgttcgtcgccgcgaacgcgcttaa
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