Halomonas sp. XH26: J4377_05620
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Entry
J4377_05620 CDS
T10290
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxh03016
]
J4377_05620 (miaB)
Enzymes [BR:
haxh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
J4377_05620 (miaB)
Transfer RNA biogenesis [BR:
haxh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
J4377_05620 (miaB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UTA80957
LinkDB
All DBs
Position
complement(1226399..1227742)
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AA seq
447 aa
AA seq
DB search
MAKKLFIKTHGCQMNEYDSSRMADLLGESHQLELTDNEKEADVILLNTCSIREKAQDKVF
HQLGRWKKLKDANPDLVIGVGGCVASQEGEALRKRAPFVDMIFGPQTLHRVPKMLDARNN
NQIAAVDVTFPEIEKFDHLPQPKSDGATAFVSVMEGCSKYCTFCVVPYTRGEEVSRPFES
VIDEVIHLADQGVREINLLGQNVNAYRGENDEGDEIDLAELIACVAAVDGIDRVRFTTSH
PVEFTDSLVDAFADIPELVSHLHLPVQSGSDRILSAMKRGHTAEEYIEKMERIRANRPDI
SFSSDFIIGFPGETEEDFEATMDLIHRIGFDHSFSFVYSARPGTPASGLPDETPESVKKQ
RLAILQERILQQAAQISRRMVGTTQRVLVSGFSPRDPGQLSGRTENNRVVNFRAANPTEL
IGYFVDVEITEALPNSLRGDLASPERY
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagctctttatcaaaacgcacggctgccaaatgaacgagtacgactcctcg
cggatggcagatctgctcggcgaatctcaccagctggaattgaccgataacgaaaaagaa
gctgacgttatcttgttgaacacctgctctattcgcgaaaaagcgcaggacaaggtgttt
catcaattgggtcgctggaaaaagctaaaagacgccaatccagacctcgtgattggtgtc
ggcggctgtgtggcaagccaagaaggtgaagcgctgcgtaagcgcgcgccttttgtcgat
atgatttttggcccacaaacgcttcaccgcgtgccaaaaatgctggacgcgcgcaataac
aatcagattgctgcggtcgatgtcacttttccagaaattgaaaagtttgatcacctgccg
cagccaaaatctgatggcgcaaccgcttttgtttctgtcatggaaggctgctcgaaatac
tgcacattctgtgtcgtgccttatacccgcggtgaggaagtctctcgcccctttgaatcg
gttattgatgaagtcattcacttagccgatcaaggggtgcgagaaattaacctgcttggc
cagaacgtgaacgcttatcgcggtgaaaatgacgagggcgacgagatcgaccttgccgag
ctaatcgcctgcgtcgctgcagtagatggcattgatcgcgtgcgctttacgacctctcac
ccggtggaatttacggatagcctggtagatgcgtttgccgacatcccggaactggtgagt
cacctacatttaccggtacagtcaggttctgaccgtatcttaagtgcgatgaagcgcggc
cataccgcagaagagtacatcgagaagatggagcgtattcgcgccaaccgcccggatatt
agcttctcttctgactttatcatcggcttccctggcgaaaccgaagaggatttcgaagca
acgatggacctgattcatcgcatcggctttgatcactcatttagctttgtttactcggca
cgcccgggcacaccagcctccggcctgccggacgaaacgccggaaagtgtcaaaaaacag
cgtctcgccattttgcaggagcgaattctacagcaggcagcgcagatcagccgacgcatg
gtgggcacgacccagcgagttctggtatccggtttctcaccgcgagacccgggccagctc
tctgggcgcaccgaaaataaccgcgtggttaacttccgggcagccaacccaacagaactg
atcggctactttgtagacgtggagattaccgaagcgctgcccaactcgttgcgcggcgat
ctcgcctctccagagcgttattaa
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