Halomonas sp. XH26: J4377_07395
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Entry
J4377_07395 CDS
T10290
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haxh03000
]
J4377_07395
Transcription factors [BR:
haxh03000
]
Prokaryotic type
Helix-turn-helix
Other families
J4377_07395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_23
HTH_28
AAA_5
Mg_chelatase
HTH_29
AAA_16
AAA_2
HTH_7
HTH_22
HTH_Tnp_ISL3
AAA
HTH_30
HTH_50
HTH_17
TrmB
HTH_11
HTH_26
HTH_1
HTH_38
HTH_3
IstB_IS21
Sigma70_r4_2
HTH_AraC
TetR_N
HTH_IclR
AAA_7
T2SSE
AAA_22
DUF2089
PF0610-like_N
Motif
Other DBs
NCBI-ProteinID:
UTA81279
LinkDB
All DBs
Position
complement(1603173..1605158)
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AA seq
661 aa
AA seq
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MLHSTLAPTRLQSEQRRHIEHIFQLGEGLDTPSLPAQATIRRSWLRCLNEYQLDPTHPRP
ARVVPQQTLIEHRESVDELLHVARAGVDQLYGQIAQLGYVLLVTDHRGITVEFRGDPNQD
QQLRKAGLYLGADWDERFAGTCAVGTCLHDRQAIICHRQEHFDASHISLTCTAAPIADPQ
GNVMAVLDISALQSPTQHESQNFSLSLVTLYARMIEDAYFLQRYRDCLMVRLDTSREFVH
VNGRGLIAIEENGQVIAANAVGRELIAEHQHRWPPWSTNYTPMLGELFECEIADILSINS
GTDDQLRAFRARASNTIHFISLLEPRRPRMAQRATPLTSELPEPLARLGADDPAMRKVQK
LADRLRNEANVNVLISGETGTGKEVVARALHESGNRAKQPFIAVNCAAIPESLIESELFG
YEPGAFTGGRSKGMRGLIPQAHGGTLFLDEIGDMPLALQTRLLRVLAEREVMPLGANTPV
KIDIRVITATHRHIEEMIQQGEFREDLYYRLNGAQLRLPALRERADKLFVIRRVFEDVAA
ERATQISPRLRADAISALLAYSWPGNIRQLKNALAFALATSESDEITVHDLPEQCLSQRI
TRNASAQLETNASEALSGSLIDLLKQHHWNISAVARELGVSRPTVYRQMQRQGIVPPNWQ
G
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgctgcattccacgcttgcacctacacggcttcaatctgaacaacgtcgacatatcgag
catatttttcagctcggtgaagggctagatacccccagcttgcctgcccaagccaccatt
cgtcgttcctggctgcgctgcctaaatgagtatcagctagaccccactcatccacgccca
gcgcgggtggtgccgcagcaaacattgattgagcaccgcgagtctgttgatgaattactg
catgtcgcccgcgccggggtcgatcagctttatgggcaaatagcgcagcttggctacgta
ctactcgtcaccgaccaccgcggcattaccgttgagtttcgcggcgaccccaaccaagac
cagcaattacgcaaagcaggcctctacctgggggctgactgggatgaacgctttgcaggc
acctgcgctgtcggtacctgcttgcatgatcgccaggcgattatctgccaccgccaagaa
cacttcgatgcatcccatatctcgctgacctgcaccgccgctcctattgctgaccctcag
ggtaatgtgatggccgtgttagatatctccgcgctgcagtcgcctacccagcacgaaagc
cagaatttcagcctatcgttggtaacgctttatgcgcgcatgattgaggatgcctatttt
ctgcagcgctaccgcgactgcctgatggtgcgtctagatacttcgcgggaatttgtgcac
gtcaacgggcgtggtttaatcgccattgaagagaatggacaggtcatcgctgccaacgcc
gtaggccgcgagctaatcgctgaacaccagcaccgctggccaccttggtccacgaattac
accccaatgctgggtgaactattcgagtgtgagatcgccgatatactcagtattaatagc
ggtactgatgatcaattgcgtgccttccgcgctcgcgccagcaacaccatccactttata
agcctgctggagccccgccgcccccgcatggcgcaacgggcaacaccgcttacttctgaa
ctgccggaacccttagctcggctgggtgccgacgaccctgcgatgcgcaaagtacaaaaa
ctggccgaccgcttgcgtaatgaagctaacgtgaacgtgctgattagcggcgaaaccggc
accggtaaagaggtggttgcacgggcgctgcacgaaagcggcaaccgcgccaaacaaccg
tttattgccgtcaactgtgcggccattcccgagtcactgattgaaagcgaactgtttggc
tacgaacctggcgcctttaccggcggccgctccaaagggatgcgcgggcttattccacag
gctcatggaggcacgctgtttttagacgaaatcggagatatgccgttagcgctacaaacc
cggctgttgcgcgtgctggccgaacgggaagtcatgccgctgggggctaacacgccagtt
aaaatcgatattcgtgttattacggccacccatcgccatatcgaagaaatgatccagcaa
ggagaattccgcgaagacctctattaccggctaaacggtgctcagctgcgactacccgcg
ctacgcgaacgcgccgataagctatttgttattcgccgcgtgtttgaagatgtcgccgcc
gaacgcgccacgcaaatatcgccgcgtctacgcgcagatgctatcagtgcgctgctcgcg
tattcctggcccggcaatatccgtcaacttaaaaacgctcttgcttttgccctggccact
tcggaaagtgacgaaatcaccgttcacgatctgccagaacagtgccttagccagcgaatt
acccgcaacgcgtcggcccaacttgaaacgaacgccagcgaagccctttcaggttcactt
atcgatctgctcaagcaacatcactggaatatcagcgcggttgcccgtgagctaggcgtt
tcgcgtcccacggtgtatcggcaaatgcagcgccaagggattgtgccccccaactggcag
ggctga
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