Halomonas sp. XH26: J4377_08565
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Entry
J4377_08565 CDS
T10290
Name
(GenBank) 3'-5' exoribonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03030
DNA replication
haxh03430
Mismatch repair
haxh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J4377_08565
03430 Mismatch repair
J4377_08565
03440 Homologous recombination
J4377_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haxh03032
]
J4377_08565
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_08565
Enzymes [BR:
haxh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J4377_08565
DNA replication proteins [BR:
haxh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J4377_08565
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J4377_08565
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
UvrC_M
Cho_C
GIY-YIG_UvrC
GIY-YIG
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UTA81494
LinkDB
All DBs
Position
complement(1853991..1855376)
Genome browser
AA seq
461 aa
AA seq
DB search
MSNTPLIFIDVETTGTRATRDRITEIAALKVVNDHIVDRWVSLINPGTSVPSHISQLTGI
YDEMLIDAPSFQTIAHSLREWLGEDCLVAHNARFDASFLRNEFKRADITYQPLLRCTLRI
SRRLIPELPKHNLRALLAHFNIPQARQHRAEDDATALWKLWETWQQQYDAGSWQAALADE
QRHRSLPAHLPSEQLTGLPASPGVYLFYGHNRLPLYVGKSINLRSRVLGHFQRDHQDDKE
MRLAQQIQHIEWEETAGDLSAQLREAQLVKELMPIMNRQLRRQGHLKTWYWPTDQPCPTL
VSGKAISQPQPGKLFGLFRSAKEAKDALRNIAETHQLCPQALGIDKGTGRCFANQLGKCR
GACCGQEPLENHTQRAQEALASFQVKTWPWPGRIIIREKSRKNGPTSHHVVDHWCYLGSA
TTKQRALGLKGVTAKFDVDTYRILNRFLREPERHNLTVLPL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacacaccactgatatttattgatgttgagacgacaggcacccgtgcgacgcgt
gaccgcattaccgaaattgctgccttaaaggtagtcaatgatcacatagtggatcgctgg
gtcagcctgattaatcctggcaccagcgtgccttctcacattagccagctcaccggcatt
tatgatgaaatgctgattgatgcgccctcttttcagaccattgcgcacagcttgcgcgaa
tggctcggtgaagactgccttgtagcccacaatgcacgctttgatgccagctttctgcgc
aacgaattcaagcgtgccgatattacctatcagccgctactccgctgcacactgcgcatt
tcccgccgcttaatacctgaactgcccaagcacaatctccgcgccttattggcgcatttc
aacattccacaagcccgccagcatcgggcagaggatgatgccactgcgctttggaagctg
tgggaaacctggcagcagcagtatgacgctggcagttggcaagccgctctagccgatgag
cagcgccaccgaagcctgcccgcacatttacccagtgagcaactaaccgggcttcctgct
tctccaggggtttatttgttttatggtcacaaccgccttcccttgtacgttggcaaaagc
attaatttacgcagccgcgtgcttggccatttccagcgcgaccaccaggacgacaaagag
atgcgccttgcccagcaaatacagcacattgagtgggaagaaaccgctggcgatttaagc
gcccagctaagagaggctcaactagtcaaagagctgatgccgattatgaaccgacagtta
cgccgtcaggggcatttaaaaacgtggtattggccaaccgatcaaccttgcccaacgctg
gtcagcggcaaagccatcagccagcctcagccgggaaagctatttgggctgtttcgaagt
gccaaagaagctaaagatgcgctgcgcaatattgccgaaacacatcagctttgtccgcaa
gcgctaggaatagataagggaacaggacggtgttttgctaatcagttaggcaagtgtcga
ggcgcctgctgtggacaggagccacttgaaaaccacacgcagcgtgctcaagaagcacta
gcatcttttcaagtaaaaacatggccttggccggggcgaattattattcgcgagaaaagc
cgtaaaaatggcccaactagccaccatgtggtcgatcactggtgctatttaggcagcgcc
acgaccaaacagcgtgccttggggctaaagggagtcactgctaaatttgatgtggatact
tatcgcatcctaaaccgttttttacgcgaaccagagcggcacaacctgacggtgctgccg
ctctag
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