Halomonas sp. XH26: J4377_10050
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Entry
J4377_10050 CDS
T10290
Symbol
nfo
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4377_10050 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_10050 (nfo)
Enzymes [BR:
haxh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
J4377_10050 (nfo)
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4377_10050 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UTA78329
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All DBs
Position
2167132..2168052
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AA seq
306 aa
AA seq
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MHYLGAHVSAAGGADQAVFRAVEIGANGFALFTKNQRQWKGKPLTDEAIAAFKRACQTHG
FGPEQILPHDSYLINLGHPETAGLEKSRAAFLDEMQRCEQLGLTLLNFHPGSHLNKISEA
DCLKRIADSINEALLASQGVTAVIENTAGQGTNLGWRFEHLAEIIAHVDDKTRVGVCIDT
CHAFAAGYDLRTAEATKATLDELGKVVGFEYLRGMHLNDAKSAFASRVDRHHSLGKGNIG
LDAFTTIMRDERIHDIPMILETVEPGIWADEINWLRAQVPGAQVPGAQVPGAQVPGAQVP
EAAPGK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcactatcttggtgcccacgtaagcgccgcgggtggcgcggatcaagcagtgttccgt
gcggtagaaatcggcgcaaatggctttgctctgttcaccaaaaaccagcgacagtggaaa
ggtaaaccgctgaccgatgaggctattgctgcatttaaacgagcctgccaaacccacggg
tttggcccggaacaaattttaccccacgacagttacctgattaacttaggccacccggaa
accgctgggcttgaaaaatcacgcgctgcgtttttagacgaaatgcagcgctgcgagcaa
ctaggtctcacgttattgaacttccacccaggcagtcatctgaacaaaatcagcgaagcc
gattgcctgaaacgcattgcagactccatcaacgaagcattactagcctcacaaggtgtt
acggcagtgattgaaaacactgccgggcaaggcaccaacctcggttggcgcttcgagcac
ttagcggaaattattgcccacgtcgatgataaaacccgtgttggcgtttgtattgatacc
tgccacgccttcgccgcagggtatgacctacgtaccgccgaggccaccaaagcaacgttg
gacgagctaggcaaggtagtcggttttgagtatttacgcggtatgcatttaaacgatgcc
aagagtgccttcgccagccgtgtagaccgccaccacagcctgggtaaaggcaatatcggc
ctggacgcgttcacaacgatcatgcgagacgaacgcattcatgacataccgatgattctg
gaaaccgtcgaacccggcatttgggctgatgaaatcaactggctacgtgctcaagtaccc
ggtgctcaagtacccggtgctcaagtacccggtgctcaagtacccggtgctcaagtgcct
gaagcagcgcctggcaaatag
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