Halomonas sp. XH26: J4377_10365
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Entry
J4377_10365 CDS
T10290
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haxh03009
]
J4377_10365
Enzymes [BR:
haxh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
J4377_10365
Ribosome biogenesis [BR:
haxh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
J4377_10365
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
TRAM
Cons_hypoth95
Methyltransf_25
SAM_MT
RrnaAD
MTS
DNA_methylase
Methyltransf_15
Methyltransf_11
adh_short
Methyltransf_23
TehB
Motif
Other DBs
NCBI-ProteinID:
UTA78387
LinkDB
All DBs
Position
complement(2238620..2240086)
Genome browser
AA seq
488 aa
AA seq
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MAMLGKRRPSRPASGHSGLVRQPSRKTESKDDISTTLVVERLAHDGRGVAHNVEGKTVFI
DQALPGEHVDVAIHVTRKRYDEAHIKNRLTSSEQRVEPPCAYFGQCGGCDLQHLNLTAQR
QHKRDVVTELMARQGLTLGPIAALDGSSEHYRRRARLGVRVDGQGNVLLGFRAPNSHRLV
DIEQCHVLVPALNKLILPLRQLLATLASPRLVGHVELLATDEATVVLVRQLKAHDQDRAR
WQQFAEQQQVSLGTWLGRETPVLHWNGAHGGATPVLQEVLNLDELGIQRASSPTSEHCLS
GDKASSLVTLRFSPGDFLQVNAEVNQKMVAQVVAWLKPAPGQQLVDLFAGIGNFSLPLAA
AGAKVLAVEGNPAMVERITANADANLLDVHAQQADLSDAKKVQMLLSEHQQIDAIVLDPP
RSGAEAACQVLGSYNVPRVAYISCDPATLARDAAHLVHAGYRVKQVAVADMFLHTAHLET
LMLFEYEG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgggtaagcggcggccatctcgccccgcctcgggacactcagggctagtt
cgccaaccaagccgtaaaactgagtcaaaagatgatatctcgacaacgctggtggttgag
cgtttagctcatgatggtcgtggtgtggcgcataatgtcgagggaaaaacagtctttatt
gatcaagcgcttcccggtgagcatgtcgatgtagcgatacacgtgacgcgcaagcggtat
gacgaagcgcatataaaaaatcggctcacctcttcagaacagcgggttgagcctccctgt
gcttactttgggcagtgcggaggctgtgatttacagcatcttaatcttactgcacaacgc
cagcataagcgcgacgttgtcaccgagctaatggcgcgtcagggccttacgctaggtcct
attgctgcgttagatggtagtagcgagcactaccgacgtcgcgcccgtttgggggttagg
gtagatggtcaggggaatgttctactggggtttcgagcacccaacagccaccgattagtt
gatattgagcagtgccatgtgctggtgccagcgctgaacaaattgattcttccgttacgg
caactgctggcaacattagcctcgccccgtctcgttggccatgtcgaattactggcgacc
gatgaggcgacagtcgtgctagtgcgtcagttaaaagcccatgatcaagatagagctcgc
tggcagcagtttgcggaacagcagcaggtctcgctcggcacttggttagggcgggaaaca
cctgttttgcactggaatggtgcacacggaggcgctacacccgttctacaagaagtgctt
aatcttgatgaactcggaattcaaagagcgagttcacccacaagtgaacactgtttgtcg
ggtgataaagcatccagcctagtgacgttacgtttttcaccaggtgactttttacaggta
aatgctgaggttaaccaaaagatggtagcccaggtggtagcatggttaaagccagcgccg
gggcaacagctcgtagatctctttgcagggattggtaacttcagtttgccgttagccgcc
gcaggagcaaaggtgcttgctgtagagggcaatccagcgatggtggagcgaattaccgct
aacgctgatgctaatctactggatgtgcatgcccagcaagcagacttaagtgacgccaaa
aaggtgcaaatgctattgagcgagcatcagcaaattgatgcgattgtgctggatccgccg
cgcagcggcgcagaagcagcttgccaagtattaggtagttacaatgtaccccgggtggcc
tatatttcttgtgacccggcaacgcttgctcgcgatgcggcacatcttgtgcatgcaggt
tatcgcgtcaagcaagtagcagtggccgatatgtttttacacactgctcacctggaaacg
ctgatgctatttgaatacgagggctag
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