Halomonas sp. XH26: J4377_10450
Help
Entry
J4377_10450 CDS
T10290
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03018
RNA degradation
Brite
Enzymes [BR:
haxh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
J4377_10450 (rhlB)
Messenger RNA biogenesis [BR:
haxh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
J4377_10450 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UTA78401
LinkDB
All DBs
Position
complement(2258476..2259750)
Genome browser
AA seq
424 aa
AA seq
DB search
MSESEQTTASAQNRKPKRRRRKPRRRQSNWDLRQFQVPAVAGKWRFHDFDLPLPLMRAIH
AQGFEYCTPIQSEALRHTLLGGDIVGKAQTGTGKTAAFLISVMAYFLEEPTPDGQKQGAP
RALIIAPTRELALQIEKDAKALARFTQLNVASVVGGMDYQKQRDSLGKKIDILVATPGRL
LDFHQKRDIDLSEVEVLVLDEADRMLSMGFIPDVKRIIRYTPKKEERQTFLFSATFTDDI
LSLASQWTLDPAHVEIEVTVENQADIDQRVYLVSDDDKQRLLVNLLTQESFERVMVFGNR
RDLVRKLDDLLKKAGVSVAMLSGDVPQNQRIKTLESFREGEIQVLVATDVAGRGIHIEDV
SHVINYTLPEDPEDYVHRIGRTGRAGAKGVSISFVGEEDAFSLPEIERYINGKLPCEHPP
EGML
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaacagaccacagcatcggcccagaaccgcaagcctaaacgccgccgt
cggaagccgcgtcgtcgtcaatcgaactgggatcttcgtcagtttcaggtgcccgccgtt
gccggcaagtggcgcttccatgactttgatttaccgctgcctttaatgcgtgccattcat
gcccaagggtttgagtactgcacgcctattcagtcagaggcactgcgtcacacgttgctg
ggtggcgatattgtcggcaaggcgcaaacaggcaccggaaaaaccgccgcctttttgatc
tcggtaatggcttattttctggaagagccgacccctgatggccaaaaacaaggcgcaccc
cgtgcgttgattattgcgcctacccgggagctggcactgcaaattgaaaaagatgctaaa
gcgcttgctcgcttcacgcagctcaatgtggccagtgttgtcggcggtatggactatcaa
aagcagcgcgacagcttgggtaagaagatcgatatcctggtggcaacacccggtcgcttg
ctggatttccaccagaagcgcgatattgacctctccgaagttgaggtgttggtattggat
gaagcggatcgcatgctttccatgggttttattcccgatgtgaaacgtattattcgctat
acgcctaagaaagaggagcgccagacgtttctgttctcggcaaccttcaccgacgatatc
ttaagcctagcgagtcaatggacgctcgatcctgctcatgtagagattgaagtcaccgtt
gagaaccaggcagatatcgatcagcgtgtttatctagtctctgatgacgacaagcagcga
ctgttggttaacctgctgacgcaggagagcttcgagcgcgtgatggtgtttggtaaccgt
cgtgatctcgtgcgcaagctagatgatttgctgaaaaaagcaggcgtcagtgttgctatg
ctgtctggtgacgtgccacaaaatcagcgcatcaaaaccttggagagcttccgtgaggga
gaaatccaagtgctggtggcaactgatgtcgcagggcgtggtattcatattgaagatgtc
agccacgtgatcaactacacgctgccggaagacccagaagattacgttcatcgcattgga
cgtaccggtcgtgcgggtgccaaaggcgtctcgattagttttgttggcgaagaagatgcg
ttctcgctaccagaaattgagcgctacattaacggtaagctgccctgcgaacatccgccg
gaaggcatgctgtaa
DBGET
integrated database retrieval system
