Halomonas sp. XH26: J4377_11765
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Entry
J4377_11765 CDS
T10290
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh00521
Streptomycin biosynthesis
haxh00523
Polyketide sugar unit biosynthesis
haxh00525
Acarbose and validamycin biosynthesis
haxh00541
Biosynthesis of various nucleotide sugars
haxh01100
Metabolic pathways
haxh01110
Biosynthesis of secondary metabolites
haxh01250
Biosynthesis of nucleotide sugars
Module
haxh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
J4377_11765 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
J4377_11765 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
J4377_11765 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
J4377_11765 (rfbB)
00525 Acarbose and validamycin biosynthesis
J4377_11765 (rfbB)
Enzymes [BR:
haxh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
J4377_11765 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
Sacchrp_dh_NADP
NAD_binding_10
KR
Gp_dh_N
FERM_F2
Motif
Other DBs
NCBI-ProteinID:
UTA78643
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All DBs
Position
complement(2557668..2558735)
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AA seq
355 aa
AA seq
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MSKTFFITGGAGFIGSAVIRELIHNTDNQVVNVDKLTYAGNLESLVSVSDSERYTFVQAD
ICDTPVMQQLFEQHQPDVVMHLAAESHVDRSIDGPSEFIQTNVVGTAVLLEAARAYWKTL
QQQDAAKAEAFRFHHISTDEVYGDLEGTDDLFTETTPYAPSSPYSASKASSDHLVRAWQR
TYGLPTLVTNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL
IKVATEGEIGETYNIGGHNEKANLTVVETLCDLLQELVPQEHSYRELITFVTDRPGHDVR
YAIDASKIERELGWKPEETFETGLRKTVEWYLANETWWKRVQDGSYQGQRLGSIS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacgtttttcattaccggcggggcaggtttcattggttctgccgttattcgt
gagttaatccataacaccgacaaccaagtcgtgaatgttgataaactcacttatgcaggc
aatctagaatcgttggtaagtgtctccgacagtgagcgctacacgtttgtgcaagcagat
atttgcgatacacctgtgatgcagcagctgtttgaacagcaccagcccgatgtagtaatg
catctcgcagcagaaagtcacgtagatcgttctatcgacggcccctccgagtttattcaa
accaacgtggttggtactgcagttttgctagaagccgcacgcgcgtactggaaaacccta
cagcagcaagatgcagccaaggcagaagcctttcgctttcatcacatcagtacagatgaa
gtgtatggcgatttggaaggcaccgatgacctctttaccgaaactacgccttatgcgccc
agttcaccctactcggccagcaaagccagctcagatcatctagtgcgtgcatggcagcgc
acctacggcctgcccacactggtcaccaactgctctaacaactacgggccatatcacttc
ccagaaaaactgatcccgctaatgatcctcaatgccctagcaggcaagccgctaccggta
tacggcaatggccagcaaatccgcgattggctatatgtagaagaccacgctcgcgcctta
atcaaagtggccacagaaggtgaaatcggcgaaacctacaacatcggcgggcataacgaa
aaagccaacctcaccgttgttgaaacattgtgcgacctgcttcaagagctagtgccacaa
gagcattcgtaccgtgagctcatcaccttcgtgacagaccgtcccggccacgacgtacgc
tacgccattgatgccagcaaaattgaacgtgaactgggctggaagccagaagaaaccttc
gaaaccggcctaagaaaaaccgtcgaatggtacctcgccaacgaaacctggtggaagcgc
gtacaagatggcagttatcaaggtcagcgattgggtagtatttcatga
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