Halomonas sp. XH26: J4377_12600
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Entry
J4377_12600 CDS
T10290
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
J4377_12600 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_12600 (recC)
Enzymes [BR:
haxh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
J4377_12600 (recC)
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
J4377_12600 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UTA78796
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All DBs
Position
2761432..2765058
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AA seq
1208 aa
AA seq
DB search
MSANSHCSPTPFSPTSLTPGFMVVHANRLEDLRGLAVQWMRLHPLGPLENETILVQSNGI
GQWLKLALAEDPENGGAGIAAALDVMLPARFLWQAYRTVLTHVDQDGDAVPETSPFDKSR
LVWRLLRLLPTLAGQEVFAPLAQFLEVDRDQRKHYQLAERLADLFDQYQVYRADWLDAWA
NGDDVLITARGEPRPLEEHQRWQPALWRILREDVAATQGDAGLNSSRAQVHRRFLKATEQ
LEGQPCPRGLPRRLIIFGISSLPQQTLEALAALSRCCQIVLCVHNPCQFYWADIIEHKDL
LRAKRYRQRRKTGMPEALDVLGTGDADDALHLHAQPLLAAWGKQGRDYLRLLDEHDDSGN
YQTLFEQQALRIDMFEPFNGVDRDCLLSQLQDDIRELRPVAETQTHWPALNAADDSIVFH
IAHGPQREVEILHDQLLAAFSADPNLRPRDIIVMVPDIDRYAPHIAAVFGQLQNDDPRHI
PYTLSDQASRHRLPLMIALEKLLRLPELRLSVSDLLDLLDVPALRQRFGLEERDLPVLER
WMEGAGIRWGLNAKQRQTLELPGGLSQNTWAFGLRRLLLGYTVGEGHAWQGIEPFDDIGG
LEAGLAGPLATLLEKLEETWETFCQPTDAANWVARLRTLLETFFLTDNAQESVMLTKLEN
GLQQTLESSEEAQLNEPLPLSMVREHWLAQIDEHSLSQRFLAGAVNFATLMPMRAIPFKR
VCLLGMNDGEYPRSQPPLDFDLMGSDYRPGDRSRREDDRYLFLEALLSARDQLYISWVGR
SQIDNTPLPPSVLVGQLRDHLETGWQIENGTPLLEALTTEHPLQPFSRAYFDANTQVTRL
FTYAHEWREVHAPRTPQAAQSTLPPPENIPTSLTLGQLGQFLREPVRAFFNTRLGVYFEQ
EAIAELDEEPFALDGLQNWQLQDQLIAAQRHAIDRGEPRIEALHAALERFQGQGVLAMGA
FGERMRNALAEPMEALFSDYEEALGAWPIALGDPAAIHLAGSNGITLEDWLGELRQDDAG
NRCRLLLLSSSLIKNSKYQWHLLLRHWVAHLAGNLSGPMTTQLLSKAGNITLEPIAADIA
RAHLETQLSAWQHGLEVPLPLAPQAAFAWLTKLGTPDLAIEKGRESDAYAAAEKVYESGF
KTTGEADQSPYLGHQWPRFERLFFDRTANEKHTFAELTEALYAPLFYAVKGNAKKDNGNK
DNAKKAAS
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaattcacactgctcaccaacaccgttctcgccaacgtcgcttacccctggc
tttatggtggtgcacgctaaccgcctggaagacttgcgcgggctggcggtgcagtggatg
cgcttgcacccattggggccgctggaaaacgagaccattctggtgcagagcaacggcatt
gggcagtggttaaagctggcactggcggaagacccggaaaacggcggtgcgggcatcgcc
gccgcgctggatgtcatgctgcctgcgcggtttttatggcaggcctaccgcacggtgctc
acccacgttgatcaagatggcgacgcggtgcctgaaacctcgccgtttgataaatcgcgc
ttggtgtggcggctactgcgcctgctgcccacgctagcggggcaagaagtgttcgcgccg
ctggcgcagttcttggaagtcgaccgcgaccagcgcaagcactaccaattggccgagcgg
ctggcggatttgttcgaccagtatcaggtctaccgcgccgactggttggatgcctgggcc
aacggtgacgacgtgctaattaccgctcggggcgagccccgcccgctggaagagcaccag
cgctggcagcctgcgctatggcgcattctgcgcgaggatgtcgccgccacccaaggcgat
gcaggccttaacagtagccgtgcccaggtgcatcggcgctttttgaaagcgacagaacag
ctggaaggccagccctgcccgcgcggcttgcctcggcggctgattatttttggtatttca
tcgctgccccaacaaaccttggaagcgctggcggcgctctctcgctgctgccaaatcgtg
ctgtgtgtgcacaacccctgccagttctactgggcagatatcatcgagcacaaagattta
ctgcgcgccaaacgctaccgccagcggcgcaaaaccggcatgcccgaagcgttggatgta
ctgggcactggcgacgccgacgatgccctgcatctgcacgctcaaccgctactcgccgct
tggggcaagcagggccgcgactacctgcgcctgctggatgaacacgacgattcgggcaat
tatcaaactttgtttgagcagcaggcgctgcgcattgatatgttcgagccgtttaacggc
gttgatcgcgactgcctgctcagccaactgcaagatgatattcgcgaactgcgccccgta
gcggaaacccaaactcactggccagcgctaaacgcggcagatgactccattgtgtttcat
attgcccatggcccccagcgggaagttgagattcttcacgaccagctgctggccgccttc
agtgccgaccccaacctgcgcccgcgggatatcatcgtcatggtgccagatatcgaccgc
tacgcgccgcatatcgccgcggtgtttggccagctacaaaatgacgacccgcggcatata
ccctatacgctttccgaccaagccagccgccaccgcctgccactaatgattgccctggaa
aagctgctgcgcctgccagagctgcgtctttcggtcagcgacttactggatctgctcgat
gtgcccgctctgcgccagcgctttgggctggaagagcgtgacctgccggtactagagcgc
tggatggaaggcgcaggtatccgctgggggctaaatgccaagcagcgccagactctcgaa
cttcccggcgggctaagccaaaatacctgggcgtttggcctgcgccgcttgctgctgggc
tacaccgtgggtgaaggccacgcatggcaaggaatcgagccgtttgacgacatcggcggg
ctggaagcgggccttgccgggccgttagccaccttactggaaaagctcgaagagacctgg
gaaaccttctgccagcccaccgatgccgctaactgggtagcgcgcctacgcacgctgctg
gaaaccttctttctgaccgacaacgcccaagaaagcgtgatgctcaccaagctggaaaac
ggcttgcagcaaacgctggaaagcagcgaggaagcccagttaaacgaaccgctgccgctc
tccatggtgcgcgaacattggctggcacagattgatgaacacagcctttcccagcgtttt
ctagccggtgccgttaacttcgctacgctaatgcccatgcgcgccattccgtttaagcgc
gtgtgcctgctgggcatgaacgacggtgagtacccccgctctcagccaccgctagatttt
gatttaatgggcagtgactaccgccccggtgaccgttcccgccgggaagacgaccgctac
ctgtttttggaagcgctgctctctgcccgcgaccagctctacataagctgggtaggcaga
agccaaatcgacaacaccccgctaccgccttcggtactggtcggccaactgcgtgaccat
ctggaaacaggctggcagatcgagaacggcacgccgctgctggaagcgctaaccaccgag
catccgctgcagccgtttagccgcgcttattttgatgccaacacgcaagtcactcgactg
tttacctatgcacatgaatggcgcgaggtacacgcaccgcgcacgcctcaagctgcccaa
tccacacttcccccaccggaaaacatcccaaccagcctaacgcttggccagttaggccaa
ttcctacgcgagccagtacgcgccttcttcaatacccggctgggagtatatttcgagcag
gaagcgattgccgagctagacgaagaaccgttcgccctggatggcctgcaaaactggcag
ctacaagaccaacttatcgccgcccagcgccacgccattgaccgcggcgagccacgcatt
gaagcactgcacgcagcccttgagcgttttcagggccaaggtgtactggccatgggtgcc
tttggcgagcgcatgcgcaatgccttagcagaacccatggaagctctgttcagcgactac
gaagaagccctgggcgcttggccgattgcgctaggtgacccagcagccattcacctggca
ggcagtaacggtattacgttggaagattggctgggcgagctacgccaggatgacgcgggc
aaccgctgccgcctgttattactcagcagcagcctgatcaagaacagcaagtatcagtgg
catctgctgctacgccactgggttgcccacctagcgggtaacctcagcggtccgatgacc
acccagctgctttccaaggccggcaacatcaccctggaacctatcgctgccgacatcgcc
cgcgcccacctggaaacccaactaagcgcctggcaacacggcctggaagtaccgcttccg
ctagccccccaggccgcctttgcttggctaacaaaactgggcacacctgaccttgctatt
gaaaaaggcagggaaagcgacgcctacgccgcggccgaaaaagtctatgaaagcggattt
aaaactactggcgaagccgaccaaagcccctatctcggccaccaatggccccgcttcgag
cggctgtttttcgaccgcaccgccaacgaaaagcacacctttgccgaactcacggaagcg
ctgtacgccccgctgttttacgccgtgaaaggtaatgcgaagaaagataatgggaacaaa
gataacgcgaagaaagcggcatcgtaa
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