Halomonas sp. XH26: J4377_14020
Help
Entry
J4377_14020 CDS
T10290
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxh03016
]
J4377_14020
Enzymes [BR:
haxh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
J4377_14020
Transfer RNA biogenesis [BR:
haxh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
J4377_14020
Prokaryotic type
J4377_14020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UTA79065
LinkDB
All DBs
Position
complement(3059797..3060837)
Genome browser
AA seq
346 aa
AA seq
DB search
MLNLPAWQRCLDAEFGAPSPGCYRVQPEDFVVDEQLDFTPENHGEHLWLRLEKRHQTTLD
VVKSVSRLCGVTLRDVGYSGMKDRVAVTRQWLSVHLPGREAPSDLSESLAAVGITVLAQA
RHPRKLKRGVHRTNHFTLRLSGEALQHPNFFDRWEALCRHGVPNYFGPQRFGPEGRNLQR
AEALLAKGWRKRDDRQGMMLSTARSFLFNELLSERLTDGTWCQPLAGDMLMLDGTHSVFT
VDAVDDDLIGRAAALDIHPTGALWGVGELAEYQVADYEKRLLACHPMLCEGLVKSGVKRS
HRALRARLISPSIEILPNAVVLSFALPRGSFATAVVSELIAHPDFA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttaacttacccgcttggcagcgctgcttagatgccgagttcggtgcccctagtcca
ggttgctatcgcgttcagccagaagattttgtcgtcgacgagcagctggactttacgcct
gaaaatcatggtgagcacctgtggttacgtcttgaaaagcgccatcaaaccacgttagat
gtggtaaaaagcgtcagccgcctttgtggtgtcacacttcgagatgtgggctactccggg
atgaaggatcgtgtcgcagtgacgcggcagtggttaagcgtgcatttgcccggacgcgag
gcgccaagtgatttgagcgaatcattagcggcagtgggtattactgtgttggcccaggca
aggcatccccgaaaactcaaacgcggtgtccatcgcacgaaccactttaccttgcggctt
agtggtgaagcgcttcaacatccgaatttttttgaccgctgggaggcgctttgtcgccac
ggtgtgcctaactattttggaccccagcgttttggtcctgaagggcggaatttacagcgt
gcagaagctcttctagctaaaggttggcgcaagcgagatgatcgccaaggcatgatgctt
tccaccgcgcgtagcttcttgtttaacgagttgctgagcgagcgtttgacggatggaacg
tggtgccagccgctagcgggcgatatgctgatgctggatggcacacacagtgtgtttacc
gttgatgccgttgacgacgacctgatcggtcgtgccgctgcgcttgatattcatccaacc
ggtgccctgtggggtgtcggggaactcgctgagtatcaagtggctgactacgaaaaacgg
ctgttagcgtgccatccaatgctgtgcgagggattggtgaaaagcggtgtgaaacgctcc
catcgggcgctgcgagcaaggttaatttcgcctagtatcgagatattacctaatgccgtg
gtactctcatttgccttaccacggggaagttttgccacggcggtggtgagtgagttaatt
gctcatccggattttgcttaa
DBGET
integrated database retrieval system
