Halomonas sp. XH26: J4377_14800
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Entry
J4377_14800 CDS
T10290
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_14800
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
J4377_14800
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_22
AAA_16
AAA_30
DUF7577
SLFN-g3_helicase
zf-tcix
ERCC3_RAD25_C
DZR
Flavi_DEAD
DUF3987
Motif
Other DBs
NCBI-ProteinID:
UTA81817
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Position
complement(3227669..3229498)
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AA seq
609 aa
AA seq
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MPQFSPSSDPISGPPPRLRPYQTEAVKRVVGHFRASSAPAVVVLPTGSGKSLVIAELARL
ARGRVLVLAHVRELVEQNHAKYQAYGLQADIFSAGLKRKEASRQVVFGSVQSVVRNLERF
SDASFTLLVIDECHRVSLEKDASYRQVIEHLQRQNPQLKILGLTATPFRLGQGFIYHRHH
HGMVRGDEACFFADCVFEQPLRLMVKQGFLAAPKRLDMAIEGYDFSALAPAPSGLFREEE
LNRVVAGSRATPRIIQQVVEYAEERQGVMIFAATVAHAEEIISYLPADQAALITGATASQ
ERVSLIEAFKARELKFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPD
KTNCLVLDFAGNPWDLYAPEVGEPKPDSDSEPVQVECPACGHANLFWGKRDGELVIEHFG
RRCQGLVDNPNPPAKPGKGRQGTDQKQCDFRFRFKVCEQCGAENDIAARRCHGCEQLLVD
ADDKLKDALKLKDAKVLRVSGMQLEATANGRGLPRLKVTYYDEDGASLAEWFALETPAQR
RAFYAVFLRNHLRAPGAKWQPASPTEVIEEQRRLRHPDFVVGRKVGRHWQLRDKLFDYQG
RYRKAAEAG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaattcagcccttccagcgatcccatttctggcccaccaccccgtttacgcccc
taccaaacggaggctgtaaaacgcgtggtgggccacttccgtgccagcagcgcgcctgca
gtggtggtattgcccactgggagcggtaagtcgttagtgattgctgagctggccaggcta
gcccgtggccgtgtgctggtgctggcccacgtgcgtgagctggttgagcaaaatcatgcc
aagtaccaagcctacgggcttcaggcagatattttcagtgcaggtcttaagcgtaaagaa
gccagccgacaagtggtgtttggctcggtgcagtcggtggtgcgtaatctggagcgcttc
agtgacgccagttttacgttactggtgattgatgaatgccaccgagtatcgctggaaaaa
gatgccagctatcgccaagtgattgagcatctgcagcgtcagaacccacagctaaaaatt
ctcggcttaaccgctacgccgtttcggttagggcagggatttatctaccaccgccatcac
catggcatggtgcgtggcgatgaagcgtgcttctttgccgactgcgtctttgaacagccg
ctacgattgatggtgaaacaaggttttttggcggcgcctaaacggctggatatggccatt
gaaggctacgatttttctgccttggctcctgcgcccagtgggttgtttcgtgaggaagag
ctcaatcgcgttgttgccggtagccgtgctacgccaaggattattcagcaggtggttgag
tacgctgaagaacgtcaaggagtgatgatttttgccgcaacggttgctcatgctgaagaa
atcatcagctacttacctgcggaccaagcggcgttgattaccggcgcgacggcctcccaa
gagcgcgtctctctgattgaggcgttcaaggcgcgtgagcttaagtttctagttaatgtg
gccgtgctaaccacagggttcgatgcgccccatgtggatttaatcgctattctgcggccc
acggaatcggtgagcctttatcagcagattgttggccgagggctgcgtttatcgccggat
aaaaccaactgcctagtgttggatttcgcaggcaatccctgggatctttatgcgccagaa
gtcggcgagccaaaaccagacagcgacagcgaaccggtccaggttgagtgtccagcgtgt
ggccatgccaatctgttttggggtaagcgtgatggagagctggtgattgagcattttggc
cgccgctgccaggggctggtagacaatcccaatccgcccgctaagccgggcaagggcagg
cagggcaccgatcaaaaacagtgtgattttcgttttcgctttaaagtttgtgagcagtgt
ggcgctgagaatgatattgccgcccgccgatgtcatggttgcgagcaactgctggtggat
gccgacgataagctcaaagacgcactcaaattaaaagatgccaaagtgctgcgagtcagc
ggtatgcagttagaggccacggccaatgggcgggggctgccacgtctaaaagtgacctat
tacgatgaagatggcgcgagcttggcggagtggtttgcgctggaaacgcctgctcaacgg
cgggcattttatgctgtttttttacgtaaccacctgcgtgccccaggcgctaagtggcag
cctgcttcgccgaccgaggtgatcgaagagcagcgccgcctgcgccatcctgattttgtt
gtggggcgtaaagtcggacggcactggcagcttcgcgataagctgtttgactaccaaggg
cgttatcgcaaggcggctgaggcaggctag
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