Halomonas sp. XH26: J4377_17695
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Entry
J4377_17695 CDS
T10290
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
haxh Halomonas sp. XH26
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haxh02000
]
J4377_17695 (ybiO)
Transporters [BR:
haxh02000
]
Other transporters
Pores ion channels [TC:
1
]
J4377_17695 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
UTA79737
LinkDB
All DBs
Position
complement(3888777..3891158)
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AA seq
793 aa
AA seq
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MTPLRLFPRLGIWLLMLFAFLTTPALAQTTLSAQSEDVANAEEQPSYSALADLLEDEQAR
QELIELLRNQASALPNELTSDLSPEAAAQGSNLAPEDVSLPRQLAELTSRVVGDVGGQIE
QAVAVVGNLFTGQGASSFDMAAFVSAAINLGIVIVATFAIFLLCRRLAKPLFTKISGWSQ
QGSGLTPVLRLVLCVAIAAVVDVLLVAFAYVGGNLLAAFAVGETGELSTRASLFLNAFLV
IELLKAGVRMLFSSRYEGLRLLPISAKEASYWNRWLARLIGMVGYGLMVVVPLVNFYIAA
TLGQAVGTFIMLLAFIYAVGVVLKNRVRLRDNLNQMAARATMTASRVSLRLFARTWHLFA
LLYFLMVFVLTLTRPGDALPFVLFATLKTLAAVVIGLLISAFLTQTIGRRIQLSDDLRRK
LPMLEVRLNSYVPNALRVLRTVLLITVIMVVLDAWGVFNLAAWYASERGANLVGKLTSVA
IILIIAFGVWLGLASLIEHKLNPETGHGEPSARAKTLLSLFRNALVITMVTMTGMIILSE
IGINIGPLIAGAGVLGIAIGIGGQRLVQDVITGIFIQVENAMNTGDVVTVGGVTGTAERL
SIRSVGIRDLSGTYHIVPFSSVDTVSNYMREFGNHVGEYGIGYNESIDEAIEQLQLAFED
LKESEEHSHKLLADLTVAGVTALADSSVNIRVVIKTTPGDQWGVGRAYNRLVKLRFDAAG
IEIPFPHTTLYFGETKGGKTPPANVRVLDSTAERKKVETSPIRQESEQPSNQSVQATKES
DHLKPDHGDVDGV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccattacgtttattccccaggctaggcatctggttattgatgctattcgccttt
ctgacaacgccagcactggctcaaactacgctaagtgcgcagagcgaagacgtcgctaac
gcagaagagcagccctcttattcggctcttgccgatctgctggaagatgagcaggcacgc
caagagctgattgagctgttgcgaaaccaagcgtcagcgttacccaatgagcttaccagt
gacttatcaccagaggccgccgcccagggcagcaaccttgcccctgaggatgtgtcgctg
cccaggcagcttgcagagctaaccagtcgtgtggttggcgatgtgggtggacagatagag
caggcagtggccgtggtgggcaacctgtttaccggccaaggcgccagctcgttcgacatg
gccgcgtttgttagtgcggcaattaatctgggtatcgtgattgttgcgacgttcgcgata
tttttgctttgccgccgtttggctaaaccgttattcactaaaattagcgggtggtctcaa
cagggcagcggtttaacgcccgtgctgcgtttggtgttgtgtgttgctattgctgccgtc
gtagatgtgctgttggttgcttttgcttacgttggcggtaacttgttggcggcatttgcg
gtgggggaaacgggagaactctctactcgtgcctcgctattcctgaacgctttcttggtt
attgagctgttgaaagccggtgtgcgtatgctgttctcttcccgctatgaagggctgcgc
ttgttacctatttcagcaaaagaagcttcctactggaatcgctggttagcgcgtttaatt
ggcatggtcggctatggcttgatggtggtcgtgccgctggtcaatttctatattgcggcg
accttgggtcaagcagtcggcacctttattatgttgctggccttcatctacgcggtcggc
gtcgtgcttaaaaaccgtgtacgcctgcgtgataatcttaaccagatggcagcgcgagcg
acgatgaccgctagccgcgtgtcgctgcgcttatttgctcgaacctggcacttattcgca
ttgctctacttcctgatggtgtttgtgctgacgttgacacgccctggggatgcattgccg
tttgtactgtttgccacattgaagacattggcagccgtggtcatcggccttttgatctcg
gcgttccttacgcaaacgattggccgtcgtattcagctatccgatgatctgcgtcgtaag
ctaccgatgctggaagtgcgcttaaatagctatgtgcccaatgccctacgtgtgctgcgt
accgtgttattaataacggtcattatggtcgtcttggatgcttggggagtgtttaactta
gcggcatggtatgcctccgaacgtggcgcgaacctcgtcgggaaacttaccagcgtcgcc
ataatcttgatcattgcgttcggtgtgtggctggggctagcgagtctgatcgaacataag
ctcaacccggaaacggggcatggtgagccttctgcgcgtgctaaaacgctgttgagtctg
ttccgtaacgccttagtgattaccatggtgacgatgaccggcatgatcatattgtcggaa
ataggcattaatatcgggccgctcattgctggtgccggtgtgttgggtatagcgattggt
attggtggtcaaagactggttcaagatgttattacgggcatctttattcaggtagagaat
gccatgaataccggtgatgtggtgacggtaggcggtgtcaccggtactgccgaacgatta
agtattcgttcggtagggatacgtgatttgtctggcacttaccatatcgtgccgttttcc
agtgttgatactgtgtcgaactatatgcgtgagttcggtaaccacgtcggtgaatacggt
attggctataacgagagcattgacgaggcgattgaacagctgcagttggcgttcgaagat
ctgaaagagagcgaagagcacagccataagctgctggctgacttgacggtcgcaggcgtt
accgcgctggccgacagctctgtcaatattcgtgtggtgatcaagacgacgccgggcgat
cagtggggtgttggtcgtgcttataaccgtttagtgaagttgcgctttgatgcagcaggc
atcgagattccattcccgcataccacactctatttcggtgaaactaaaggtggcaaaaca
cctcccgctaatgtgcgcgtgttggactccactgctgaacggaaaaaggtagaaacatcg
ccaatccgtcaggaaagcgaacagccatccaatcagtcagtgcaggccacaaaagagtct
gatcatctaaaacctgatcatggtgatgttgacggtgtgtaa
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