Halomonas sp. XH26: J4377_18175
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Entry
J4377_18175 CDS
T10290
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh00300
Lysine biosynthesis
haxh00470
D-Amino acid metabolism
haxh01100
Metabolic pathways
haxh01110
Biosynthesis of secondary metabolites
haxh01120
Microbial metabolism in diverse environments
haxh01230
Biosynthesis of amino acids
Module
haxh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
J4377_18175 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
J4377_18175 (dapF)
Enzymes [BR:
haxh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
J4377_18175 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Draxin
Motif
Other DBs
NCBI-ProteinID:
UTA79824
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Position
complement(3988359..3989192)
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AA seq
277 aa
AA seq
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MLLHFTKMHGLGNDFMVVDLVTQRARLRDEQIRQLADRRFGIGFDQLLVVEPPRDPEMDF
RYRIFNADGSEVENCGNGARCFARFVRDQRLTHKHEIHVETAGGPLVLNVQHDGMVRVDM
GRPRFNPATLPFEAPGDQPLHAVEVDGDTLELGVVSMGNPHAVLQVESVDSAPVEHLGPL
LESHPRFPKRVNVGFMQVVSPSEICLRVYERGSGETLACGTGACAAVASGIRQGLLKSPV
TVHLPGGQLSIEWPDPEAPLVMVGPATRVFDGRVTLN
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgcacttcaccaaaatgcatggtctgggtaatgattttatggtggtagatctg
gtgactcagcgagcgcgtctgcgtgatgagcagattcgccagctggcagaccggcgcttt
ggcattggcttcgaccaattattggtggttgagccgccccgtgacccagagatggacttt
cgctaccgtatttttaatgcggatggcagcgaagttgaaaattgcggcaatggcgcgcgc
tgctttgcacgttttgttcgcgaccagcgcctgacacataagcatgaaattcatgttgaa
actgccggtgggccactggtacttaatgttcagcacgatggtatggtgcgcgttgacatg
gggagaccgcgctttaatcccgccacgttgccgtttgaggcaccgggggatcaaccctta
cacgccgttgaggtcgacggtgatacgctggagctgggagttgtctcgatgggcaatccc
catgccgtgctgcaggtggaaagtgttgatagtgcaccggttgagcatcttggtccattg
cttgagtctcaccctcgctttccgaagagggtgaatgtggggtttatgcaggttgtgtcg
cccagcgaaatttgcctgcgggtgtatgagcgtggcagcggcgagacgcttgcttgtggc
accggcgcctgcgctgctgtggctagtggtattcgtcaggggttattgaaaagcccggtc
accgttcacttgccgggtggtcagttaagcattgagtggcccgatcccgaagcgccgttg
gtgatggtgggccctgctacacgcgtctttgacggtcgtgtcacactcaactaa
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