Halomonas sp. XH26: J4377_18310
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Entry
J4377_18310 CDS
T10290
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03420
Nucleotide excision repair
haxh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4377_18310 (uvrD)
03430 Mismatch repair
J4377_18310 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_18310 (uvrD)
Enzymes [BR:
haxh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
J4377_18310 (uvrD)
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4377_18310 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
J4377_18310 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UTA79849
LinkDB
All DBs
Position
4018009..4020207
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AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNPAQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYSLLA
VTFTNKAAREMRTRLEALLSLSMRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLVKRMLKDYSIDDERFPPRQVQGFISGCKEEGLRPHQVNVDGDGYLGQMVELYERYQF
ICERGGLVDFGELLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGL
QTPMAAVGDDDQSIYGWRGAKVENIRRFEEEFPNTHTVRLEQNYRSTSAILEAANTLISH
NSERLGKNLWTDGVEGDPISVYAGFNDLEEARYIVDTIKEKVDEGFNRRDIAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRHRAREQSISLWQALHDAIQDGTLKGRAANAVQTFANLIEQLDNDASGLLLHE
IIDHITTHTGLIEHHKSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEA
FLSEAALNAGDHEADEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSIEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRSSFAQQRVESDGDLPALHVGQRVMHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLVPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatacttgatcagctcaaccctgcccagcgcgaggcagtaagc
gcaccccaaggtaacttactggtactggcgggtgccggatccggtaaaacccgcgtgctg
gttcatcgtatagcttggctaatgcaggccgaagggctttcgccttactccctgctggcg
gtcacgtttaccaacaaggccgcgcgtgaaatgcgcactcgtctggaagctctgctgagc
ctctccatgcggcatgtatgggtcggcacgtttcactctattgcccatcgcctactgcgc
acccattggcaggatgcccgactgccacaacacttccaaattatcgactccgatgaccag
ctacggttggtaaaacggatgctcaaagattattccattgatgatgaacgctttccgccc
cgccaggtacaaggcttcatctctggctgcaaagaggaaggtcttcgcccccaccaagtc
aacgtggacggcgatggttatcttggccagatggtagagctttatgagcgctatcaattt
atctgcgaacgcggcggcttagtagacttcggtgaactattactgcgcagcctagagctg
ttacgtgacaacccgccgttgctaaaccattaccgcgagcgttttggtcatgtattagtc
gatgagtttcaggacaccaatacgctgcaatacgcgtggttaaaactactcactgggctg
caaacaccaatggctgccgtcggcgacgatgaccagtccatttatggttggcgcggcgct
aaagtggaaaatattcgccgctttgaggaggagtttcctaacactcacaccgtacgccta
gagcagaactaccgctccacaagcgcgattctggaggccgctaacacgctgatcagtcat
aacagtgagcggctgggtaaaaatctgtggactgacggtgtcgagggcgaccctatttct
gtctacgccgggtttaacgatttagaagaagcccgctatatcgttgataccatcaaagag
aaagtcgatgaagggtttaatcgccgcgacattgccattctttaccgctctaatgctcaa
tcgcgcttactggaagagacgctgatccgccaaggtatgccctaccgtatttacggagga
catcgcttctatgagcgcttagagatcaagaatgctttagcttacctgcgcctactgctt
aatcgtgatgatgatgcctctttggagcgcgtgattaacgtgcccacccgcgggattggc
acccgcacggtagaaattgtgcgccatcgcgccagagagcaaagcatttcactgtggcaa
gcgctgcacgatgccatccaagacggcacgctaaaaggccgtgccgccaacgcggtacag
acatttgccaacctcatcgaacaattagacaacgatgcatctggcttgctgctgcatgaa
attatcgatcacatcactacgcataccggcctgatcgagcatcacaagagcgagcgcggc
gaaaaaggccaagcgcgcgtggaaaacctggaagagctagtgacggctgcgcgcgccttt
acccatggcgatgccttcgagacccctgaggcaggcgaaggcatggcagcgctggaagca
tttctttccgaagcggcacttaatgccggcgaccatgaagccgatgagtttgaagatagc
gtgcagctgatgaccctgcactctgctaagggcttggagtttcccgtggtgtttattgcc
ggcgttgaagagggcctgtttcctcataaaatgtcgatcgaagagccagggcggctcgaa
gaggaaagacgactttgctatgtcggcgttacccgtgcgatgcagaaactctacctgacc
catgccgaaacccgccgcctgcacggcaaagaggtatttcccaggccatcgcgctttcta
cgcgaacttccgccccacctgctggaagaagtccgcctacgtggccatatttcccgcccc
gttactgcctcacgttcaagctttgcgcaacagcgggttgaaagcgacggcgacctgcct
gccctgcatgttggccagcgggtgatgcatccggtatttggcgaaggcatcattctaaat
gcagaaggcgaaggtgctcgcgcccgcgtacaggtcagctttgaaggtgaaggggtgaaa
tggctcgtactagggtttgccaaactcgtcccactttga
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