Halomonas sp. XH26: J4377_18525
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Entry
J4377_18525 CDS
T10290
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
haxh Halomonas sp. XH26
Pathway
haxh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haxh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4377_18525 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxh03400
]
J4377_18525 (xth)
Enzymes [BR:
haxh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
J4377_18525 (xth)
DNA repair and recombination proteins [BR:
haxh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
J4377_18525 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UTA79887
LinkDB
All DBs
Position
complement(4060694..4061461)
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AA seq
255 aa
AA seq
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MKIASINVNGIRDAVDRGFLDWLAQQDADVICVQNIKAKSFELDDHILYPEGYEGYFLDA
EEDGFSGVALYCRKIPKAIMYGLGFPQCDHEGRFLQADYDRFSIATFLMPDGSDQKAKQA
FMEQYQEYLTKMSRKRREYIICGTWHVAHKTIDLANWSDNQLTSGFRPEERAWMDQVLGP
TGFIDTFREINRDAGEYTWWPKLDQDVPRERQEGWRIDYQLVGPNFRRHVVDAWIDYDAT
FSEFAPLIVEYDLAL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattgccagcatcaatgtcaatggtatacgtgatgccgtcgaccgtggcttcctg
gactggctggctcagcaggatgccgacgtgatctgcgtgcagaacatcaaggcaaaaagc
tttgaactggacgaccatattctctatccggaaggctacgaaggctactttctggatgcg
gaagaagatgggttctccggcgtggcactttattgccgcaaaattcccaaggcgattatg
tacggccttgggtttcctcagtgtgatcacgaagggcgctttctgcaggcggattatgac
cgcttcagcatcgccaccttcttgatgcctgatggaagtgatcaaaaagccaaacaggcg
tttatggagcagtaccaagagtacctgacgaagatgtcgcgcaaacgccgcgaatacatc
atctgtggtacctggcacgttgcccataaaaccattgatttggccaactggtcggacaat
cagcttacctctggtttccgtcctgaagagcgtgcctggatggatcaggtacttggccca
accggctttatcgacaccttccgcgaaattaatcgcgacgctggtgaatatacctggtgg
ccaaagctagaccaagacgtgccccgtgagcgccaagaaggctggcggatcgactaccag
ctggtcggccccaacttccgtcgccatgtggtcgacgcgtggattgattacgatgcgacc
ttctctgagttcgcaccgctgatcgttgagtatgacttagcgctgtaa
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integrated database retrieval system
