Halomonas axialensis: HAALTHF_02130n
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Entry
HAALTHF_02130n CDS
T06639
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
haxi
Halomonas axialensis
Pathway
haxi03410
Base excision repair
haxi03430
Mismatch repair
haxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HAALTHF_02130n (recJ)
03430 Mismatch repair
HAALTHF_02130n (recJ)
03440 Homologous recombination
HAALTHF_02130n (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_02130n (recJ)
DNA repair and recombination proteins [BR:
haxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HAALTHF_02130n (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HAALTHF_02130n (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HAALTHF_02130n (recJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
BBI70183
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Position
complement(128624..130420)
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AA seq
598 aa
AA seq
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MTQVSPLSQQSNQPRLEPRPLDEAVYLRAQSEGLSELQARLLASRLPGYTGELAPLVSPS
LRYLVHPEKLADGRRAAKRIAQAVAEGESIGILTDYDVDGITSHVVIRRTLVELFGVPEH
KLHSLIGHRIHDGYGISLPLVERTLSLKPLPTLVITADCGSSDEPRIARLKAARYRCGGQ
RPPCATLEGPPPSAYACVNPTRSDCDYPDKTIAGCMVAWLLMSLARGVLVEWGALPEATP
KLSPWLSYVALGTVADCVSLGGSPANRAVVSYGLTLINRMDAACWRAMAARLGADSVPFN
AETLAFQMGPRINARSRLDDPYAALHFMLAESDGVANRQLEVLDQDNQSRKAIEADMAEE
ARALAVPALEANEPAVVVLLEDGHPGVQGIVASRLVQAYGRPAVVLTRAAAPNMLTGSGR
SIDGLHLRDALQRTFELAPEALPRFGGHSGAAGVGVPREQLDTFKAAFLQAVGEQLGDTP
LYPRLWTDGELSTAQLSLATLVEIETLGPYGREFDPPLFEGRFIVEALRPVGAEGSHLMM
ELSMGAVTSKAIWFRALTPGELPSFSVGDTLHCAYKLNRNRWRGRESLQLMVEHASPV
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagtgtcacccctttctcagcagagtaaccagccccgcctagagcctcgtccc
ctggacgaggctgtttatttgcgtgcgcaatccgaagggctgagcgagcttcaggcaagg
cttttggcgtcgcggctgcccggctataccggggagcttgcgccgctggtgtcgcccagc
ctgcgctatctcgtgcatcctgaaaaactcgccgatggccgtcgtgcggcgaagcggatt
gctcaagcggtcgccgagggcgagtccataggcattctgaccgactacgatgtggacggc
atcacctctcacgtggtcattcggcgtacgctggtcgagctatttggcgtgcccgagcac
aagctacacagcttaattggtcaccgcattcacgacggctacggcatcagcctgccgctg
gtggagcgaacgctgagcttaaaaccgctgccgacgctggtgattaccgccgactgcggc
agttctgacgagccgcgcattgcgcggctgaaagcagctcggtatcgatgtggtggtcag
cgaccaccatgcgctaccctggaaggcccgccgccctcggcgtatgcctgcgtgaacccg
actcgcagcgactgcgactatccggataaaaccattgcaggttgcatggtggcgtggctg
ctgatgtcgctcgcccgcggcgtactggtggagtggggcgcattgcctgaggccacgccg
aagctctcaccgtggctctcctacgtggcgttaggcaccgtggcggattgcgtctcgctg
ggtggaagccccgccaaccgtgcggtggtgagctacggcttaacgctgatcaaccgtatg
gatgccgcctgctggcgggccatggcagcgcgcttaggggccgacagcgtgcccttcaac
gctgaaaccttggcgtttcagatggggccgagaatcaacgctcgctcgcgattggacgac
ccctacgcggcgctgcactttatgctggccgagagcgacggcgtcgcgaaccggcagctt
gaggtgctggaccaggataaccagtcccgcaaggcgattgaggcagatatggctgaggag
gcgcgggcgctcgccgttcccgccttggaggccaacgagcctgccgtcgtggtgctgctg
gaagatggccaccccggcgtgcagggcatcgtcgcttcaaggctggtgcaggcctacgga
cgcccagccgtggtgcttacgcgggcggcggcacccaatatgcttaccggctccggccgc
tctattgacgggctgcatttacgggacgcactacagcgcacctttgagcttgccccagag
gcgctgccgcgctttggaggccacagtggcgctgcaggcgtgggcgtgccacgggagcag
ctcgacaccttcaaagccgcgtttttgcaggcggtcggtgagcagctgggcgatacaccg
ctctacccgcgtctgtggaccgatggcgagctctcgaccgcccaactctcgctggcgacg
ctggtggaaatcgagacgttaggcccctacgggcgggagttcgacccgccgttatttgaa
gggcgctttattgtggaagcgctgcgcccggtgggtgcagaaggttcgcacctgatgatg
gagctctccatgggggccgtcaccagcaaagcgatttggtttcgcgcgctcacaccgggg
gagttgccctcgtttagcgtgggcgatacgctgcactgcgcttacaagctcaatcgcaac
cgctggcgcggtcgcgagtcattgcagctcatggtggagcacgctagccccgtttaa
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