Vreelandella aquamarina Althf1: HAALTHF_03930n
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Entry
HAALTHF_03930n CDS
T06639
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
haxi
Vreelandella aquamarina Althf1
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxi03016
]
HAALTHF_03930n (truB)
Enzymes [BR:
haxi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HAALTHF_03930n (truB)
Transfer RNA biogenesis [BR:
haxi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HAALTHF_03930n (truB)
Prokaryotic type
HAALTHF_03930n (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BBI70398
LinkDB
All DBs
Position
complement(254385..255302)
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AA seq
305 aa
AA seq
DB search
MPRRRRGLPVNGVVLLDKPKGLSSNHALQRAPSVRRAKAGHTGTLDPMATGLLPICLGEA
TKFSAHLLEADKMYRTRVELGVITDTGDAEGTVLERREVPNLAVEDIESVLTRFRGEIDQ
VPPMYSALKHQGKKLYELAREGKQVERAARRVSVYDARLLSFEGRAFELEVSCSKGTYIR
TLAEDIGHALGCGAHISQLRRLKTGPFDGDAMWTLEALEALASQADREAELMPVDVLVDH
LPSLSVDDTSFGRLAHGQSAHLAIGELAPDALARLYYAETFIGLGVVKGPQEVAPKRLLS
TVARS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtcgccgtcgcggattaccggtcaatggcgtggtgctgctggataagccgaaa
ggcctctccagcaatcacgcgctgcagcgtgcgccgtctgttcgacgcgcaaaagccggg
cataccggcacgctggacccgatggcgacaggcttgctgcctatctgcctgggggaggcc
accaagttttccgcgcatctgctggaagccgacaagatgtatcgcacccgggtcgaactg
ggggtgatcaccgataccggcgatgccgaaggcactgtgctggagcggcgcgaggtgcca
aaccttgcggtcgaggacatcgaatctgtcttgacgcgttttcgcggcgagatcgatcag
gtgccgcccatgtactcggcgctcaagcatcagggtaaaaagctctacgagttggcccgc
gaggggaaacaggttgaacgtgcagcgcggcgggtaagcgtgtatgatgcgcgcctgctt
tcgttcgagggcagggcgttcgagctggaagtcagctgcagcaaaggcacgtacatccgc
acgttggcggaagacattggccacgcgctgggctgtggtgcccatatcagtcagctacgt
cggctcaaaaccgggccgttcgatggtgatgcgatgtggacactcgaggcactggaagca
ctggctagccaagccgaccgcgaggcggaactgatgcccgtggatgtgctggtcgatcac
ctgccgtcgcttagcgtcgatgacacctcgtttggaaggcttgcccacgggcagtctgcc
catctagccattggtgaattagcaccagatgcgctagcacgactttattacgccgagacg
tttatcggccttggcgttgtaaaagggcctcaggaagtggcccctaagcggctgttaagt
acggtcgctcgttcgtaa
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