Vreelandella aquamarina Althf1: HAALTHF_06660n
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Entry
HAALTHF_06660n CDS
T06639
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
haxi
Vreelandella aquamarina Althf1
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_06660n (phrB)
Enzymes [BR:
haxi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HAALTHF_06660n (phrB)
DNA repair and recombination proteins [BR:
haxi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HAALTHF_06660n (phrB)
Prokaryotic type
HAALTHF_06660n (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BBI70704
LinkDB
All DBs
Position
433781..435217
Genome browser
AA seq
478 aa
AA seq
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MNLQLVWFRSDLRIHDNSALAAAAAKGPVVAVFCVALSSGVTTATAQISSISGRVVLARL
RPSLNGLNIPLLHRDIGRFDDAPKALLEVAREHGIKQLHFNYEYPLNEQRRDQSVLEAFQ
QVGITAQGHHDAVAFAPGTLLTGKGDYYGVFTPFSKAWHKQVTAEQLALRDTPSAQSPLA
IDSDPLPALPTLEDEPLDGRLWPAGENAASDNLERFLRFRGRHYKDQRDFPKVRGTSELS
PYLALGVISHRQCLQAVMSENGGHLADGDAGLTTWVNELIWREFYQHVAVGFPQVCRYQP
FQAHTKQLQWRDDDEGFAAWCEGRTGYPIVDAAMRQLVTTGWMHNRLRMITAMFLSKHLL
IDWRRGEAFLCATWSMASFAPITAAGSGQPQRVPMRHLTSAFSTPRPNPRASTQAANLLL
SGYPSSRRCLPKRAMRRLRTCSTRLTTQRPSLTTKRLASGRWMPSKRSPNNVNLSTSP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcagcttgtttggtttcgcagcgatctacgtattcatgacaattccgcactc
gccgccgctgccgccaaagggccggtagtggcggttttttgcgtagcattgagcagtggc
gtgaccacggccacggcgcaaataagctcgatttctgggcgcgtggtgttagcgcgctta
aggccctcgctcaatggcttgaatattccgctgttgcatcgcgatattgggcgtttcgac
gacgcccccaaggcgcttttagaggttgcccgcgaacatggcatcaagcagctccacttc
aattatgagtatccgctgaacgagcagcgccgcgaccagtcggtactggaggcttttcag
caggtcggtattaccgcccaaggccatcacgacgcggtggcgtttgcccccggtaccttg
ctgacaggcaaaggcgactactacggcgtcttcaccccgttttcaaaagcgtggcacaag
caagttaccgccgagcagttagccctgcgcgacacgcccagcgcgcagtcaccgctagcc
attgacagtgatccattaccagcactgccaacgctagaggatgagccgctggatgggcgt
ctctggcctgcgggtgaaaatgctgccagcgataaccttgagcgctttttacgctttcgg
gggcgtcactataaagatcagcgtgactttcctaaggtgcgcggcacgagcgagctttcg
ccctacttagcgctgggcgttatttcccaccgccagtgcctgcaagcggtcatgagcgaa
aatggcgggcaccttgccgatggcgatgcaggccttaccacctgggtaaacgaactcatc
tggcgcgagttttatcagcatgtcgcggtcggctttcctcaggtatgccgctaccagccg
tttcaagcgcacaccaagcagttgcaatggcgggatgacgacgaagggtttgccgcctgg
tgcgaaggccgcaccggttatccgattgtggatgccgccatgcgccagctagtgacgacc
ggctggatgcacaatcgtctgcgaatgattacggccatgtttctcagcaagcatctgctg
attgactggcggcggggcgaagcctttttatgcgccacttggtcgatggcgagttttgcg
ccaataacggcggctggcagtgggcagcctcaacgggtaccgatgcggcaccttacttcc
gcattttcaaccccacgacccaatccacgcgcttcgacccaggcggcgaatttattgctc
agtggctacccgagctcaagacgttgcctgccaaagcgcgccatgcgccgcctcaggaca
tgctcaacccgattgactacccagcgcccatcgttgaccacaaagcggctcgccagcggg
cgctggatgccttcaaagcgctctccaaataacgttaacctcagcacctctccatag
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