Vreelandella aquamarina Althf1: HAALTHF_11110n
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Entry
HAALTHF_11110n CDS
T06639
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haxi
Vreelandella aquamarina Althf1
Pathway
haxi03420
Nucleotide excision repair
haxi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HAALTHF_11110n
03430 Mismatch repair
HAALTHF_11110n
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_11110n
Enzymes [BR:
haxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HAALTHF_11110n
DNA repair and recombination proteins [BR:
haxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAALTHF_11110n
MMR (mismatch excision repair)
Other MMR factors
HAALTHF_11110n
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BBI71218
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All DBs
Position
complement(725044..726606)
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AA seq
520 aa
AA seq
DB search
MTTNVSLPRQVQGFISGCKEEGLRPHQVNVNGDAYLAQMVELYERYQFTCERGGLVDFGE
LLLRSLELLRDNPPLLNHYRERFGHVLVDEFQDTNTLQYAWLKLLTGQQTPMTAVGDDDQ
SIYGWRGAKVENIRRFEEEFTDTHTVRLEQNYRSTSAILEAANTLISHNSERLGKNLWTD
GIKGEPISVYAGFNDLEEARYIVDTIKEKVDEGFNRRDVAILYRSNAQSRLLEETLIRQG
MPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIGTRTVEIVRHRAR
EQGVSLWQALHDAIQDGTLRGRAGNAVQAFANLIEQLDNDAAGLPLHEIIDHVTAHTGLI
EHHKSERGEKGQARVENLEELVTAARAFTHGDAFETPEAGEGMAALEAFLSEAALNAGDH
EAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSVEEPGRLEEERRLCYVGVTR
AMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPTCWKKCA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
ttgacgacgaacgtttccctcccccgccaggtgcaggggttcatttctggttgcaaggaa
gagggcctgcgaccccatcaagtgaacgtcaatggcgatgcgtacctcgcccagatggtc
gagctctacgagcgctaccagttcacctgcgagcgaggcgggctggtggattttggcgag
ctgctgttgcgcagcctggagcttctgcgcgataacccaccgctgctgaaccactaccgc
gagcgctttggccatgtgctagtagacgagttccaagacaccaacactctccagtatgcg
tggctgaaactgctcaccggccaacaaacgccgatgacagcggtcggcgatgatgaccag
tcgatttacggttggcgcggcgccaaagtggagaatattcgccgctttgaagaggagttt
accgatacccatacggtgcgtctggaacagaactaccgctctaccagcgcaatcttggaa
gccgctaacacgctgattagccataacagcgaacggctgggtaaaaacctctggaccgat
ggcatcaagggcgagccgatctcggtatacgccggatttaacgacctggaagaagcccgc
tacatcgtcgacaccatcaaagagaaggtcgacgagggctttaaccgccgtgatgtggcc
attctttaccgctctaacgcccagtcgcggctgctggaagagacgctgattcgccaaggg
atgccctaccgcatctacggcggccaccgcttttatgagcgactggagatcaaaaacgcc
ctggcctaccttcgcctgctgctcaaccgggacgacgacgcctcccttgaacgcgtcatc
aacgtgcccacccgaggcatcggcactcgcacggtggaaatcgtccgccaccgcgcccgt
gaacagggcgtttcgctctggcaggcgctccacgacgcgattcaggatggcaccttaaga
ggccgggcgggcaacgccgtgcaggccttcgccaacctaatcgagcagctcgataacgac
gccgccgggctgcctctgcatgagatcatcgaccatgtcaccgcgcacaccgggttgatc
gagcaccataaaagcgagcgtggcgagaaaggccaggcgcgggtcgaaaacttggaagag
ctggtcaccgctgcccgcgccttcacccatggcgacgcctttgaaaccccggaagcgggc
gagggcatggccgcgctggaagccttcctttcggaagccgccctcaacgcaggcgaccat
gaagccgaggagttcgaggacagcgtgcagctgatgacgctgcactcggcgaaagggcta
gagtttcccgtggtgtttatcgccggtgtggaggaggggctgttcccgcataagatgtcg
gtggaggagccggggcggctcgaggaggagcgtaggctttgctatgtaggcgttacccgc
gccatgcagaagctctacctgacccacgcagaaacccgacgcctgcacggcaaagaggtg
tttccacgcccttcgcgctttctgcgcgaactgccgcccacctgctggaagaagtgcgcc
taa
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