Vreelandella aquamarina Althf1: HAALTHF_16760n
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Entry
HAALTHF_16760n CDS
T06639
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
haxi
Vreelandella aquamarina Althf1
Pathway
haxi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HAALTHF_16760n (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxi03019
]
HAALTHF_16760n (recQ)
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_16760n (recQ)
Enzymes [BR:
haxi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HAALTHF_16760n (recQ)
Messenger RNA biogenesis [BR:
haxi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HAALTHF_16760n (recQ)
DNA repair and recombination proteins [BR:
haxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HAALTHF_16760n (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
BTRD1
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
BBI71873
LinkDB
All DBs
Position
complement(1083246..1085018)
Genome browser
AA seq
590 aa
AA seq
DB search
MHDDSAALKVLREVFGFERFRGPQQAIIEHVMAGGDALVLMPTGGGKSLCYQIPALLREG
TAIVVSPLIALMQDQVAALIQNGVRAAYLNSSLEMHEAMEVENRLRAGELDLLYIAPERL
ATARMQMLLEQTHIALFAIDEAHCVSQWGHDFRPEYRQLSHLHQRFPDVPRIALTATADV
PTRHDIMEHLQLQEAALYNNGFDRPNIRYHIAENQGNAKEQLLSFIREHHDGEAGIVYCL
SRRKVEETAAWLARQGLTALPYHAGLPAEQRQQHQTRFLREDGVMIVATIAFGMGIDKPD
VRFVAHLNLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVITLRQMQQDSGAADQQKRI
EQQKLDAMLGLCEIISCRRQALLHYFGDSLDEPCGNCDNCLTPPDTWEATVAAQKALSCV
YRTEQRFGVTYLVDVLLGKRNERISRFGHDGLSTFGIGKELTASEWKALFRQLIASGYLS
VDMEGHGAIKLTANAKPILRGEQRLTLRKPSKPARRGAKGASAAQGHGVLWEALRQHRKA
LADAQGVPAYVIFNDATLAELVAQNRKRCRRWAPSRASAHASWRIMAKAF
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgactcggcagccctcaaagtactgcgggaagtctttggctttgagcgcttt
cgtggcccgcagcaggccatcattgagcatgtgatggccggaggcgatgcgctggtgctg
atgcccactggcggcggtaaatcgctgtgctatcagatccctgcgctgctacgtgaaggc
accgcgattgtggtctcgccgctcatcgcgctgatgcaggaccaggtggccgcgctgatc
cagaacggggtgcgcgccgcctacctgaactccagccttgagatgcatgaggcgatggag
gtggagaaccgcctgcgtgcaggcgagctggacctgctctacatcgcgcccgagcggctg
gccacggcacgcatgcagatgctgctcgagcagacccacattgcgctgttcgccattgat
gaagctcactgcgtttcccaatgggggcacgatttccgccccgagtatcgccagctctcc
cacctgcaccagcgttttcccgacgtgccgcgcatcgcgctcaccgccaccgccgacgtg
cctacccggcacgacatcatggagcacctgcagcttcaggaagccgcgctctacaacaac
ggcttcgaccgccccaatattcgctaccacatcgcggaaaatcagggcaatgccaaagag
cagctgctgagtttcatccgcgaacaccacgacggcgaagcgggcatcgtctactgcctc
tctcggcgcaaggtggaggagaccgccgcttggctggcacgccaggggttgaccgcgctg
ccctaccacgccgggctgcccgccgagcagcgccagcagcatcaaacccgttttctgcgc
gaagatggcgtgatgatcgtcgccaccattgccttcggcatgggcatcgacaaacccgac
gtgcgtttcgtggcgcacctcaatctgcccaaaagcatcgaagcctactatcaggaaacc
ggccgcgccgggcgcgatgggctgcccgccgatgcctggatggcctacgggcttcaggac
gtgatcactctgcgccagatgcagcaggattccggtgccgccgaccagcaaaagcgcatc
gaacagcagaagctcgacgccatgctagggctctgcgagatcattagctgtcgccgtcag
gcgctgctccactactttggcgattcattagacgaaccctgcggaaactgcgataactgc
ctcaccccgcctgacacctgggaggccacggtggctgcgcagaaggcgctgtcgtgcgtc
taccgcaccgaacagcgcttcggcgtcacttacttggtggatgtactgctgggcaagcgc
aacgaacgtatcagccgcttcggtcacgacggtttgagtacgttcggcattggcaaagag
ctcaccgccagcgagtggaaagcgctgtttcgccagctgatcgccagcggctatctgagc
gtggacatggagggccatggcgcgatcaagctcaccgccaacgccaagcccatactgcgc
ggcgagcaacgtctcaccctgcgcaaacccagcaagcctgcgcggcgcggagccaaaggg
gcatctgccgcccagggccacggcgtactgtgggaagcgctgcgccagcatcgcaaagcg
ctggccgatgcccagggcgtacccgcctacgtgatcttcaacgacgctaccctggccgag
ctggtagcgcaaaaccgcaaacgctgcaggcgctgggcaccatctcgggcatcggcgcac
gcaagctggaggattatggcgaaggctttctag
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