Vreelandella aquamarina Althf1: HAALTHF_18430n
Help
Entry
HAALTHF_18430n CDS
T06639
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
haxi
Vreelandella aquamarina Althf1
Pathway
haxi03030
DNA replication
haxi03410
Base excision repair
haxi03420
Nucleotide excision repair
haxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAALTHF_18430n (polA)
03410 Base excision repair
HAALTHF_18430n (polA)
03420 Nucleotide excision repair
HAALTHF_18430n (polA)
03440 Homologous recombination
HAALTHF_18430n (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haxi03032
]
HAALTHF_18430n (polA)
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_18430n (polA)
Enzymes [BR:
haxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAALTHF_18430n (polA)
DNA replication proteins [BR:
haxi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HAALTHF_18430n (polA)
DNA repair and recombination proteins [BR:
haxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HAALTHF_18430n (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HAALTHF_18430n (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BBI72089
LinkDB
All DBs
Position
1202357..1204624
Genome browser
AA seq
755 aa
AA seq
DB search
MARAPIVLVDGSSYLYRAFHALPPLTTSNGQPTGAVKGVLNMLKRLMKDYPDSPMAVVFD
APGKTFRDELYSDYKAHRPPMPDDLRSQIEPLHACVKALGLPLLCIEGVEADDVIGTLAH
QATQAGRDAVISTGDKDMAQLVNGHITLVNTMKEETLDEAGVEEKFGLPPALIIDFLALM
GDKVDNIPGVPGVGEKTAIGLLQGMGGGLDTIYGDLERVTTLGFRGAKTLPKKLEEHREQ
AFLSYQLATIKTDCDLPVGLDDLDIAHPDREALVELYKQMEFKQWLAELLEGNDEGVDDV
AGGEPVSETTDSTTETAPTERHDHVITEQAELEAWLERLNEAERFCFDLETTSLNYMDAE
IVGIGVSLEAGEAAYIPVAHDYLDAPQQLDRKAVLAALKPLLEDPAKTKIGQNLKYDISV
LANYDISVVGPFADTMLASYVLNSTATRHDMDSLALKYLGEKTISFEEIAGKGAKQLTFN
QIALEQAAPYACEDVDITLRLQDTLRPQVEREGRLAEVLDHLELPLISVLSRIERNGVAV
DAERLYEQSQQLEQRIRELESEAFELAGREFNLGSPKQLGQILFEEQKIPVIKKTPRARL
PPPKPCWKSWRWTTLPKVIMQHRGLAKLKSTYTDKLPRLLNKTTGRVHTSYHQAVTATGR
LSSSDPNLQNIPIRTEEGRKIRQAFVARPGYRIVAADYSQIELRIMAHLSEDKGLLEAFA
EGRDIHTATAAEVLAPRLKRCLATSGAALRRLTLA
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgccccaatcgtgctcgtcgatggctcttcgtacctctaccgcgcgtttcat
gcgctgccgccgctaacgacctctaacggtcagccgaccggagccgtgaagggcgtgctg
aacatgctcaaacggctgatgaaagactaccccgatagccccatggcggtggtgttcgac
gcgccgggtaaaaccttccgcgatgagctgtacagcgattacaaggcccaccgcccaccc
atgccggatgacctacgcagccagatcgaaccgctgcacgcctgtgtcaaagcactcggc
ctgccgctgctgtgcatcgaaggggtcgaggcggatgacgtgattggcacgttggcgcac
caagccactcaggctggccgcgacgcggtcatctccaccggcgataaggacatggcccaa
ctggtgaacggccacatcacgctggtcaacaccatgaaagaggaaaccctcgatgaagcg
ggcgtggaggagaagtttggcctgccgccggcgctgattatcgacttcctcgcactgatg
ggcgacaaggtggacaacatccccggcgtgcctggggtgggcgagaaaaccgccattggc
ctgctgcaaggtatgggcggcggtttagacacgatttatggcgatttagagcgcgtgacc
accctcggtttccgcggcgcgaaaacgttacccaaaaaactggaagagcaccgcgagcaa
gcgtttctctcctatcagttagcgacgatcaaaaccgactgcgacttgccggtggggttg
gatgatttggacattgcccacccggaccgcgaagcgctggtcgagctctacaaacagatg
gagttcaaacagtggctcgccgagctgctggaaggcaacgacgaaggcgtggacgatgtg
gcaggcggtgagcccgtctcggaaacaaccgacagcacgacggaaacggcgccgaccgag
cgccacgaccatgtgattaccgagcaggccgagctggaggcgtggctcgaacggctcaac
gaggccgaacgtttctgcttcgacttggaaaccaccagcctcaactacatggatgcagaa
attgtgggtatcggcgtgtcgctggaagccggggaagctgcctatattccggtggcccat
gattacttggatgctccccagcagcttgatcgcaaagcggtgctggcagcgttaaagcca
ctgctggaagacccggccaaaaccaaaattggacaaaacctcaaatacgatatttccgta
ctggcgaactacgacatttctgtcgttggcccgtttgccgacaccatgctagcgtcgtat
gtgctcaactccaccgccacgcgccacgatatggattcgctggcgctgaagtacctgggc
gagaaaaccatttcgtttgaagagatcgcgggcaaaggcgccaagcagctgacgtttaat
cagattgccctagagcaagcggctccctacgcctgcgaggatgtagatatcaccctgcgc
ctacaggacacgctgcgtccccaagtggagcgggaagggcgcttggccgaggtgctcgac
caccttgagctaccactaatcagcgtgctgtcgcgcatcgagcgtaacggcgtggccgtg
gatgccgagcgcctgtacgagcagagccagcagctcgaacagcgcatccgcgagttagag
agtgaagcttttgagctggcgggccgcgagttcaacctggggtctcccaagcagctgggc
cagattctgttcgaagagcagaagattccggtcatcaagaaaaccccaagggcgcgcctt
ccaccgccgaagccgtgctggaagagctggcgctggactaccctgcccaaggtgatcatg
cagcaccgtggcctggccaagctgaagtccacctataccgataagctgccgcgcctgctc
aataaaaccaccgggcgggtacacaccagctatcatcaggcggttacggccaccgggcgg
ctgtcgtcgtcggacccgaacctgcagaatattcccatccgtaccgaggaggggcgcaaa
atccgccaggcgttcgtggcgcgccctggctaccgcattgtggcggcggactactcgcag
atcgagctgcgtattatggcgcacctttcggaagataaagggctgctggaagcgtttgct
gaagggcgcgatatccacaccgctaccgcggcggaagttttggcacctcgcttgaaaagg
tgtctggcgaccagcggcgcagcgctaaggcgattaactttggcttga
DBGET
integrated database retrieval system
