Vreelandella aquamarina Althf1: HAALTHF_22950n
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Entry
HAALTHF_22950n CDS
T06639
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
haxi
Vreelandella aquamarina Althf1
Pathway
haxi03030
DNA replication
haxi03430
Mismatch repair
haxi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HAALTHF_22950n
03430 Mismatch repair
HAALTHF_22950n
03440 Homologous recombination
HAALTHF_22950n
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haxi03032
]
HAALTHF_22950n
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_22950n
Enzymes [BR:
haxi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HAALTHF_22950n
DNA replication proteins [BR:
haxi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HAALTHF_22950n
DNA repair and recombination proteins [BR:
haxi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HAALTHF_22950n
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBI72636
LinkDB
All DBs
Position
1500439..1501014
Genome browser
AA seq
191 aa
AA seq
DB search
MVALDMETTGLDERRHAIVSIGVVPFTLGRISMAQRRYWVVKPPRPLDEESIAYHHITHS
EIADAPDLDSVLDELLAVLAGRVVVVHFRNIERPFLDAAVKARRGEGVLFPMIDTMSLEA
RWHRQTLWARFRRWLGRPPVSIRLNASRERYGLPVYQGHHALIDALATAELLQAQIANRY
SPETPLKALWC
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctggatatggaaaccaccggactcgatgagcgacgccatgcgatcgtcagc
attggcgtcgtgccgtttacgttagggcgtatatccatggctcagcgccgttactgggta
gtgaaaccgccccgtccgttagatgaggaatcgatagcgtatcaccacatcacgcactcg
gagattgccgatgcgccagacttggatagcgtgctagacgagctgttggcggtgttggcc
gggcgggtcgtagtggttcactttcgtaatatcgagcgaccttttctcgatgcggcggtg
aaggcgcgccgtggtgagggggtgttgtttcccatgatcgataccatgtcgttggaagcg
cggtggcatcgacaaacactgtgggcgcgctttcgccgctggctggggcgtccgccggta
tcgattcgcctcaacgccagccgcgagcgctacggcttacccgtttaccaaggccaccat
gcgctcattgatgctcttgccactgccgagcttttgcaggcgcaaatcgccaatcgctat
agccctgagacgcctttaaaagcgctgtggtgttag
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