Vreelandella aquamarina Althf1: HAALTHF_34430n
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Entry
HAALTHF_34430n CDS
T06639
Name
(GenBank) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
haxi
Vreelandella aquamarina Althf1
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxi03016
]
HAALTHF_34430n
Enzymes [BR:
haxi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HAALTHF_34430n
Transfer RNA biogenesis [BR:
haxi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HAALTHF_34430n
Prokaryotic type
HAALTHF_34430n
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BBI73984
LinkDB
All DBs
Position
2249457..2250047
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AA seq
196 aa
AA seq
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MALARRYRYIFLNQISRPVMERHNVTWCRDPLDADAMHRAAQALVGEHDFSSFRAAGCQS
KTPWRQMHFVEVKRHGPLVVIDIQGNAFLHHMIRNIAGALASVGRGAQDEGHIERLLAMK
NRQKGDVTAPACGLHFVDSIYDERFELPKEPLGPNLLAFTGEWTGERVLPESPRVAARRR
LTFSKQAKPEQQETSS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
ttggcgctggcgcgccgttaccgctatatctttctgaatcagatcagccgcccggtcatg
gagcgccacaacgtcacctggtgtcgcgacccgctggatgccgatgccatgcatcgtgct
gcccaggcgttggttggcgagcatgacttcagtagttttcgcgccgccggttgtcagtcg
aaaaccccctggcggcaaatgcactttgtggaagtgaagcgtcacggcccgctggtggtg
atcgatatccaaggtaatgccttcctgcatcacatgatccgtaacattgccggagcgctg
gccagcgttggccggggggcgcaggacgaagggcatattgagcgcctgctggcgatgaaa
aatcgccagaagggcgatgtcacggcgcctgcctgcggcctgcatttcgtcgactccatc
tacgatgagcgtttcgagctacccaaagagccgctaggcccgaatctactcgcctttact
ggggagtggaccggagagcgcgtattgccggaaagccctcgggtggccgcaaggcggcgg
ctgacgttctccaagcaagcgaaacctgagcagcaggagacttcctcatga
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