Vreelandella aquamarina Althf1: HAALTHF_38220n
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Entry
HAALTHF_38220n CDS
T06639
Symbol
aspS
Name
(GenBank) aspartate--tRNA(Asp/Asn) ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
haxi
Vreelandella aquamarina Althf1
Pathway
haxi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HAALTHF_38220n (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
haxi01007
]
HAALTHF_38220n (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haxi03016
]
HAALTHF_38220n (aspS)
03029 Mitochondrial biogenesis [BR:
haxi03029
]
HAALTHF_38220n (aspS)
Enzymes [BR:
haxi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HAALTHF_38220n (aspS)
Amino acid related enzymes [BR:
haxi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HAALTHF_38220n (aspS)
Transfer RNA biogenesis [BR:
haxi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HAALTHF_38220n (aspS)
Prokaryotic type
Other AARSs
HAALTHF_38220n (aspS)
Mitochondrial biogenesis [BR:
haxi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HAALTHF_38220n (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
BBI74421
LinkDB
All DBs
Position
complement(2501921..2503339)
Genome browser
AA seq
472 aa
AA seq
DB search
MRLKHRYIDLRRPDMIEKLRLRSRISHNVRAYLENQGFLDIETPVLTRATPEGARDYLVP
SRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIEASFV
EEDDIMGITEAMIRQLFQEVLSVELPEFPRMTWQEAMDRFGSDKPDLRIPLELTDVDDLM
QQVSFNVFSGPAKAEDGRVAALKVPGGAKLSRKEIDEYTKFVGIYGAKGLAWIKVNERAK
GLDGLQSPIVKFMENVVEELLDRVGAEDGDIIFFGADKARIVNEAIGALRVKLGADLNLY
TQAWAPLWVVDFPMFEADDNGRLSPLHHPFTAPSCSPEELKADPASALSRAYDMVLNGTE
LGGGSIRIHNQTMQSTVFDILGIGEEEAQEKFGFLLDALQYGAPPHGGLAFGLDRLVMLM
AGAKTIREVIAFPKTQSAACLMTDAPGEVSADQLKELNIRLRQKAKAEAAGE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgaaacaccgctatattgatctacgccgcccggatatgatcgaaaaactgcgg
ctgcgttcgcgtatttctcataacgtacgtgcttacctagaaaaccaaggctttctagat
attgaaacgcctgtgctgacacgagccacgcctgaaggtgcccgggactacctcgtgcct
agccgtactcacgcgggcagcttctttgcactgccacagtctccccagctgtttaagcag
ctgctgatggtggcgggttttgaccgctactaccaaatcgcaaagtgcttccgcgatgaa
gacctgcgcgctgaccgtcagcctgaattcacacagatcgatatcgaagcctctttcgtg
gaagaagacgacatcatgggcattaccgaagccatgattcgccaactgttccaggaagtg
ctgagcgtcgaactgccggaattcccgcgaatgacttggcaagaagccatggatcgcttt
ggttcggataaacccgatctgcgtattccgctggagctcaccgacgttgacgacctgatg
cagcaggttagtttcaatgtgttctcagggccggccaaggcagaagatggccgcgtggcg
gctcttaaagtaccgggtggtgccaagctttcccgtaaagagatcgacgaatacaccaag
ttcgtaggtatctacggtgctaaaggccttgcctggatcaaagtgaacgagcgtgccaaa
gggctagatggcctgcagtcgccgatcgttaagttcatggaaaacgtggtcgaagagctg
cttgatcgtgtcggcgctgaagatggtgacattatcttcttcggtgcggataaagcgcgt
atcgtcaacgaagccattggcgcgctgcgtgtcaagctgggtgccgacctgaacctttac
actcaagcctgggcgccgctgtgggtcgttgacttccccatgttcgaagccgacgacaat
ggccgtctaagcccgcttcaccacccgtttacagcgccctcctgctcgccggaagagctg
aaagcagacccggctagcgcgctttctcgcgcttatgacatggtgcttaacggtaccgaa
ctgggtggtggctctatccgtatccacaaccaaaccatgcaaagcaccgtgtttgatatt
ttggggatcggcgaagaagaagcacaagagaagttcggcttcctgctggatgccttgcag
tacggcgcaccgccccatggcggcttggccttcggtctggaccgcttagtcatgctcatg
gccggtgcgaaaaccattcgtgaagtcatcgccttcccgaaaacccaaagtgctgcttgt
ttaatgaccgatgcaccgggtgaggttagcgctgatcagctcaaagagctgaatattcgc
ttacgccaaaaagccaaagcggaagcagcgggcgagtaa
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