Vreelandella aquamarina Althf1: HAALTHF_39740n
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Entry
HAALTHF_39740n CDS
T06639
Symbol
fis
Name
(GenBank) DNA-binding protein Fis
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
haxi
Vreelandella aquamarina Althf1
Brite
KEGG Orthology (KO) [BR:
haxi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haxi03000
]
HAALTHF_39740n (fis)
03036 Chromosome and associated proteins [BR:
haxi03036
]
HAALTHF_39740n (fis)
03400 DNA repair and recombination proteins [BR:
haxi03400
]
HAALTHF_39740n (fis)
Transcription factors [BR:
haxi03000
]
Prokaryotic type
Helix-turn-helix
Other families
HAALTHF_39740n (fis)
Chromosome and associated proteins [BR:
haxi03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
HAALTHF_39740n (fis)
DNA repair and recombination proteins [BR:
haxi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HAALTHF_39740n (fis)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_8
Fis_N
HTH_30
Xre-like-HTH
Phage_NinH
DCAF17
Motif
Other DBs
NCBI-ProteinID:
BBI74594
LinkDB
All DBs
Position
2598184..2598495
Genome browser
AA seq
103 aa
AA seq
DB search
MTERNLLSSERSSHLSGTLADPSDSAQPQPLREAVEMAMRRYFEHLDGSQTTDLYAMVMA
EVEAPLLACVMEHTDGNQTRAADVLGLNRGTLRKKLKLYGLIE
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacgcaacctgctctccagcgaacgctcctcccatctctctggcacgctagca
gacccttccgacagtgcccagccacagccgctaagagaagcggttgagatggcaatgcgc
cgctacttcgaacatctcgatggcagccaaactaccgatttgtatgccatggtgatggca
gaggtggaagctcctctgttggcatgcgtgatggagcacaccgatggcaaccaaacgcgc
gcggcggatgtgcttggtttaaaccgtggcacgctgcgcaaaaagcttaagctgtatgga
ttaattgagtga
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