Harmonia axyridis (harlequin ladybird): 123670782
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Entry
123670782 CDS
T10650
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear RNA export factor 1-like
KO
K14284
nuclear RNA export factor
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03008
Ribosome biogenesis in eukaryotes
haxr03013
Nucleocytoplasmic transport
haxr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
123670782
03015 mRNA surveillance pathway
123670782
03008 Ribosome biogenesis in eukaryotes
123670782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123670782
03009 Ribosome biogenesis [BR:
haxr03009
]
123670782
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
123670782
mRNA cycle factors
Stress granule specific factors
123670782
Ribosome biogenesis [BR:
haxr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123670782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
Tap-RNA_bind
TAP_C
NTF2
LRR_4
LRR_8
Motif
Other DBs
NCBI-GeneID:
123670782
NCBI-ProteinID:
XP_045460287
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All DBs
Position
1:complement(7939429..7953046)
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AA seq
630 aa
AA seq
DB search
MSKKNLIKPSSWKNQYSEHDYRSSGGERRVSFKKSKNKKNKGNVKDWSTSIRAHLYDEDI
DVDMGTSRPSKSNNKYHKKGNRSGSPTPKHSKKRLWEGPTSWYRVTLPFGNKYDKQFVQR
TLSEKLSPLPFWPIAWEANGNITTFYVDDYKTAEKLHDLHQTIQMPDGFKMVIKVNYGSP
NVDITTELKEKMKLAMAKRYNAANKALDLTKFHSDPILQDFFCALYKPIILLAVIDIITE
NIPDLEALNLNDNKIQILTFLQKFIAKLNKVKILYLGQNKIKDIAMLDSLKGLPLVELFL
EGNPLCGKFKDKSIYTSEVRSRFPKIMKLDGLDLPPPICFDLADEVALPTPAQTFLCEAN
AGSIIRQFLEQYFTLFDSENRQMLIQAYQEQAILSMTMAYPYGTKDKSVNWLNWYSTDNR
NLLKLTDPERRFKLLKQGNVSIVSFLKDMPETKHDLMNFLVDLTVCNSMMMSFNVSGSFT
ELKGGHKNPPVRWFSRTFVIVPVGTGFCISNELLHITNATEEQIKALKSAPPVPAAVPAP
VVNASPSVVASPTIGVPPPAVTSPLVPVANCIDDGTKQQMLQAVIVHSEMNLEWSIECLQ
ETEWNFDEATACFNEFHSQGRVPPEAFVKN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaaaaatttaataaaaccttcgtcgtggaaaaaccaatatagtgagcatgat
tatcgttcttctggaggagagaggcgagttagtttcaaaaaatcaaagaataagaaaaac
aaaggaaacgtgaaagattggagcacttcaattagagctcacttgtacgatgaagatatt
gacgttgatatgggcactagtaggccaagcaaatcgaataacaaatatcataaaaaggga
aatagatcaggatcacctacacctaaacattctaagaaaagattatgggaaggacctact
agttggtatcgagtaactctgccgtttggtaacaagtatgataaacagtttgtacaacga
acactatcggaaaaacttagccctcttccattttggcctattgcttgggaagctaatgga
aatattacgacattctatgtagatgattataaaacagcagaaaagcttcatgacctacac
caaaccattcagatgcctgatggatttaagatggttataaaagtaaattatggttcacca
aatgtggatatcactacagaattgaaggaaaaaatgaagcttgcaatggctaaaagatat
aatgcagcaaataaagctcttgatttaacaaaattccatagtgaccctatcttacaagat
tttttttgtgctctatataaaccaataatacttttagctgttattgatataataacagaa
aatataccagatttagaagcacttaacttgaatgataataaaattcaaatattaacattc
ctgcagaagttcatagctaaattgaataaagttaaaatattgtatctaggacaaaataag
ataaaggatattgcaatgttagattccttgaaaggacttcctttagtcgaactcttttta
gagggcaacccattatgtggtaaattcaaagataaatctatttatacaagtgaagtcaga
tccaggtttcccaagataatgaaattggacggtttggacctacctccgccaatatgtttt
gacctagccgatgaagtagctctacctactcctgctcagacgtttctttgtgaagctaat
gccggatccatcatacggcaatttcttgagcagtatttcacattattcgacagtgaaaat
cgacaaatgttgatacaggcatatcaggaacaggctattctttcaatgactatggcatat
ccttatggtaccaaagataagtctgtaaattggctgaattggtacagcaccgacaacagg
aaccttctcaagttgacagacccagaaagaagattcaagctcttgaaacaaggaaatgtt
tctatagtgtcttttctgaaagatatgccagagactaagcacgatttgatgaattttcta
gtggatttaacagtgtgcaattctatgatgatgagcttcaacgtatcgggatcttttaca
gagttgaaaggaggtcacaaaaatccacctgtaagatggttctccagaacatttgtaatt
gttccagttggtacgggattttgtatcagtaatgaattacttcatataaccaatgctact
gaagaacagattaaggcattaaaatcagcgcccccagttcctgctgcagtacctgccccc
gttgtgaatgcctcaccatctgtagtggcatctcctacgataggagttcctccaccagca
gttacttctcctttggtacctgtggctaattgcattgatgacggtaccaaacagcaaatg
ttacaagctgtaatagtgcattcggagatgaacttggaatggtctattgaatgtttacaa
gaaacagaatggaattttgatgaagccacagcatgtttcaatgaattccatagtcagggt
agagtaccgccagaggcatttgtgaagaactga
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