Harmonia axyridis (harlequin ladybird): 123671304
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Entry
123671304 CDS
T10650
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
haxr03037
]
123671304
Cilium and associated proteins [BR:
haxr03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
123671304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
CEP135_TSGA10_CC
CCDC39
Rod_CreS
PUMA_CC
ERM_helical
DUF8221
Motif
Other DBs
NCBI-GeneID:
123671304
NCBI-ProteinID:
XP_045461010
LinkDB
All DBs
Position
1:complement(816229..842659)
Genome browser
AA seq
2049 aa
AA seq
DB search
MSKRLLSRLRARSRSPIYVASEDVFPTTPQDAGVATFGDKPPRDHLPVEPRIATEEEVVL
TSSASRRPPLQPATTCEDACEMSRPLTSSRKPEPKKPSMAEKKRLPGFRPKSRAEASSLG
SSSRSDGGRLRGDGGGGSSDDDTFNRENLDLRIKLQEEASLYKRRLDQYRQAQSNQASLI
SRLQAKVLQYKKRCSELEAQMANNIYPTDQLTPPTSRSGISAPGPSSALEQAQMHLRESR
EERISDLDTALRRLEEERRRCETLMKLNGTLRDQLEESHQTNEALTVDLQKLTNDWEVLR
EEMLIKEEEWREEEQTFNDYYSSEHNKLLNLWRDVVAVKRMFTDVQTDTERDLKKLRSEV
EVVGRDVASACDRIETKVDFILSNHLLQDQERYQQEQAASKLREEIEDLKLQNDSFRAEI
DLKEERMQELLKDVQMLEGRCTDMDQGVSQVGKMQEEIDILQSALRDIAHALIQDAEVVE
PELLMSSHIHLSGSTSVPQKSPKRTAHGVASSAAFAESTISAVQAALHKYQSFIHGLQVK
LQSNKEQLVLVRKQYENSEENVQELEKRAKELVAQLDASRAQCSQLAQDREILQKSLETV
KLDKNALDKTRIELGASLENLSNDYKKLQKTAQILQKESENLQDEKVFLQSEIDRLNQNI
DLGEMNIRSEEDRSSRLREELLTVREELNKLYLSHDMLEQQKLEADILISSLEKTKADYE
LQLDRLMGDKSEVHDSLLKKQNVAAILEADKNKLQEELKKMQDERTALQLQCNDHQNDIQ
SLRKELLQAEQQRLDLESDRVSLTEKCKFLEMDKGKIEMELNQVTRERNDLSNQLTVLGR
KKDAVNEEVMRLKQKLEQASETNGRVNRNLEELVKECEEKQCTMDSMDKEIQRLQELLAS
SRSEKEALEAVLFDTQTNLEACDVKKSNLEKELQEQLVKQEQLKSQANRLAKELERSEKK
SLEMKTSLSQQAGNKEAEFRQNLESLKQQNEENVRKLTEERDKIRRNLEKRMQQSLQQLG
SEKDAEIQQLLDRVESLQNHIDTLCQQHEELMLRAENDKQQALLLAHHDHQALHDRYEGV
RRELEGEKETLERFKREANSRLEQDRININQLKEELNKYKTKLEEAKTRTEEEKIKLEQR
ISEVTHEKEVSVGEAENLKIQLNLTENKCSTINDQLHETIRKLKEVENHSDSLRKELTDV
RRQLADSTFEKEKYHATNKDLRDHIKKTESEKRDQARQIEEYSIKISSLEEMKSSIETER
NRFQNQVRDLEKELTQSDHSIQSLKDEIQKAQTAGNQQQAEEKELQARLLNEMEERERSH
QEVLQLRKQISELERNLEHCRQELNRSLAHTGHLEEQWHAREQDLLVHLEDSRAREKRLE
DQKHNLEVCLVDATQQIQELKAKLGGSEGKVRALENQLAQLEGNKREVEQKLSSVVMTLR
RIAGVQLDGTVTMPYRLMSPSRRWSPARSHDDSRDLIVDVDPEVVRKGVRNLMQQVAHIE
RERDDYKNQVDNVKKQLKEVSDSQSKGDSKLTKITQNMRSLQEEKGSLETRLGQKTVELQ
SQTEALNKKTVELKTMREKIVSLELSVGSGQAEKQQYEEKLEKMKLALSRLESEKRGLQD
ELTRLENRSTKLELQRMSADGDLQRLQMMLQEKEVAIQKLQEKCESQGRAMASLEERCVS
LKSTIDQLNLSLERAANSESETKAEIQKLQRDLLEATTSSQTGSEKLKQFQKSLSTCENE
RRLINERFEVTQQNLAELRRNNQILQDQVSRLNQELANNEVVKSSLESQLRLAQWPSETV
GGGKEEEELHRQLQTCQKERNEYRAKLDSLSSKMRHLENENRNLERSSLSKSLARTKSYE
LPMEKYQMDSQHSETEKDKHELENRELRSKIARLESELTEKELELSRLRSLQRSSLDGKF
DRAEIERYRAAQLQAERLLEAREQSYRQQVARLENQVSLLRDQLNQEVKRRQQYVLRSTQ
AGREMAQLRQTLGDSLKTVAQDPSLDSLLLEHETKRLDHSIAATSLPPSLALPTSSSSAY
LRSLTPQPK
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgcctcctctcaagactacgggctcgctctcgctcccccatctacgtcgcc
agcgaggacgtcttcccgacgacgccccaagacgcaggcgtcgcgacgttcggggataaa
cctccgcgcgaccaccttccagtcgaaccgcgaatcgcgacggaagaagaggttgtgttg
acgtcctccgcgtcccgacggccaccgcttcaacctgcgacgacgtgcgaagacgcctgc
gagatgtccaggccattgacgagctctaggaaaccagagccgaagaagcccagtatggcg
gagaagaagaggttgcctgggtttcggccaaaatccagggcagaagccagcagtttgggc
tcaagcagcaggtcagacggtggtcgtcttaggggggacggtggtggaggaagcagcgat
gatgacaccttcaacagagagaacctagacctgaggataaagttgcaagaggaggcgtcc
ctctataagcgcaggctggaccaatacagacaagcgcagtctaatcaagcatctctcatc
agccgactacaagctaaggttctccagtataagaagagatgttcagaactagaagctcag
atggcgaacaacatatacccgactgatcagctgacaccacccacgagtcgatcaggcatt
agtgctccaggaccaagcagtgccctagagcaggcccagatgcatcttcgagaaagcaga
gaggagagaatatcagatttggatactgctcttagacggcttgaggaagaacgaaggagg
tgcgagaccttgatgaaactaaacggcactctcagggaccaactggaagagtcccaccag
accaacgaggccctcactgtcgacctccagaagctcacgaacgactgggaggtactacgc
gaagagatgctgatcaaggaagaagagtggagggaagaggagcagaccttcaacgactac
tacagttctgagcacaacaagctgctgaacctgtggcgtgacgtggtggccgtgaagagg
atgttcacggacgtgcagacggacacggagagggacctgaagaagctgaggagcgaggtc
gaggtggtggggagagacgttgcctccgcctgcgacaggatcgagaccaaggtggacttc
atattatcaaatcaccttttgcaggaccaagagaggtaccaacaagaacaggctgcttcc
aaactgagagaggagatcgaagatctgaaactgcagaacgactcgttcagggccgaaatc
gacctgaaagaggagaggatgcaagagctgctcaaagacgtgcagatgttggaaggacgt
tgcactgacatggatcagggcgtgtcgcaagtgggcaagatgcaggaggagatcgacatc
cttcagagcgccctcagagacatcgctcacgcccttatccaggacgctgaagttgtggaa
ccggaactgctgatgtcttcgcatattcacctcagcggctcgacatctgtgcctcagaaa
tctccaaaaagaacggctcatggcgtggcgtctagtgctgctttcgctgaaagtaccatt
tcagcggttcaggcagccttacacaagtaccaatcatttatacacggactacaggtgaaa
ctccaatcaaataaggagcaacttgtcctagtccgcaaacagtacgagaactcggaggag
aacgtgcaagaactagagaagagggctaaggaactggtcgctcagctcgatgctagtcga
gctcaatgttcccaacttgcccaggatagggagatactccagaagtccctggagacggtc
aagctcgacaaaaacgcattggacaagacgaggatcgagcttggtgcatctctcgagaac
ctcagcaacgactataagaagctccagaagacggcccaaatcctccaaaaagagtcggag
aaccttcaggacgaaaaggtcttcttgcagtcggagatcgacagactgaaccaaaacatc
gaccttggcgagatgaacatcagatcggaggaggacagaagcagcagactgagagaggag
ctgttgactgtgagggaggaacttaataagctctatctctctcatgacatgctggagcag
cagaagctggaggctgacatccttatctcgtctctggaaaaaaccaaagccgactatgaa
ctccaactagataggctgatgggagacaaatctgaagttcacgattctttattgaagaaa
caaaatgtagcggcaatactcgaggcagacaagaacaagttacaggaagagctcaagaag
atgcaagatgagagaacggcattgcagctgcaatgcaacgatcatcagaacgacatccag
tccttgaggaaagaactccttcaggcagaacaacaaaggctcgatctggaatcagataga
gtgtctttgacggagaagtgcaagttcttggagatggacaaagggaagattgaaatggag
ttgaaccaagtcacgagggagaggaacgacctcagcaatcagcttacggttcttggaaga
aaaaaggacgccgtcaacgaagaagtgatgaggttgaagcagaaactggaacaggccagc
gagaccaacggcagggtcaacaggaacctggaggaattggtgaaggaatgcgaagagaag
cagtgtaccatggattccatggacaaagaaatacagcgtctacaggagctgctggcctct
tcgcgatcggagaaggaagccttagaagccgtccttttcgacactcagaccaacctggag
gcctgcgacgtcaagaaatcaaacctggagaaggagctccaggagcagttggtcaagcag
gagcagctcaagtctcaggccaaccgcctagccaaagagctggagaggtcggagaagaag
tctctggagatgaagaccagcctgagccagcaggccggaaacaaagaggccgagttcaga
cagaacctggagagtttgaagcagcagaacgaggagaacgtgagaaagctgacggaggag
agggataagatcaggaggaacctggagaagaggatgcagcagtctttgcaacagttgggg
agcgagaaagacgcggagattcaacagcttctggatagggtggagagtctgcagaaccac
atcgatacgttgtgtcagcagcacgaggagttgatgctgagggccgagaatgacaagcag
caagctcttcttcttgctcaccacgatcatcaagccctccacgatcgttacgaaggagtt
cgtcgcgaactggagggagaaaaagagaccttggaaaggttcaagagagaggccaacagt
cgtctggaacaagacaggatcaacatcaaccagctgaaggaagaattgaacaagtacaag
acgaaactcgaggaagcgaagaccaggacagaagaagagaagataaagctcgaacagagg
atatccgaggtcactcacgagaaagaagtttctgttggagaggctgaaaatctcaagatt
caactgaatctgaccgaaaacaagtgtagcaccatcaacgaccaacttcacgagaccatc
cgcaagttgaaggaggttgagaaccattctgacagcttgaggaaggaactgacggacgtt
cgaagacagttggctgacagcactttcgaaaaagagaagtaccacgccaccaacaaagat
cttagggaccacatcaagaagactgagagcgagaagagggaccaggctagacagattgag
gaatattccatcaagatatcaagcctcgaagaaatgaaatcctccatcgaaaccgaacgc
aaccgcttccaaaaccaggtcagagacctggagaaagaactgacccagtccgaccacagc
atccagagtctgaaagacgagatccaaaaagctcagacggcaggcaaccaacagcaggcc
gaagagaaggagctgcaagccaggctcctgaacgagatggaggaacgagagaggtcgcac
caggaggtcctccagctgaggaagcagatatcggagctggagaggaacctggagcactgc
cggcaagagctgaacaggtcgttggcgcacactggtcacttggaggagcagtggcacgcc
agggagcaagatttactagtgcatctggaggatagtagagctagggagaagaggctggag
gaccagaagcacaacttggaagtgtgtctggtggatgccacacagcagattcaggagctc
aaggctaagctgggaggctcagagggcaaagtgagagccttggaaaaccaactggcccag
ttggaaggtaacaagagagaagtggaacagaaactcagtagcgtagtgatgactttgagg
aggatagccggtgtacaacttgacggcactgtcacaatgccctataggcttatgagtcca
tctagacgttggagtccagctagatctcacgatgactccagagacctcatcgtcgatgtc
gatccggaagttgtcagaaaaggtgtgaggaacttgatgcaacaggtggctcacattgaa
cgagagagggacgattacaagaaccaagtggacaacgtcaagaaacaactcaaggaagtc
agcgatagccaatccaagggcgacagcaaattgaccaagataactcagaacatgaggagt
cttcaagaggagaagggcagcttggagaccaggctcgggcagaaaacggtcgagttacag
tctcagactgaagcgttgaataaaaaaacggtggaactgaagacgatgagagagaagata
gtttctttggagctgtctgtaggtagtggtcaagcggagaagcaacaatacgaggagaaa
ctggagaaaatgaagctcgctctctctcgtctcgagtctgagaagagagggctacaagac
gaactgacgaggctcgagaaccgatccacgaaactggaactgcagaggatgtcggccgat
ggggacctacaacggcttcagatgatgctgcaagaaaaagaagtggcgattcagaaatta
caagaaaaatgcgagtctcaaggcagagccatggccagcttggaagaaaggtgcgtgtcg
ttaaaatcgacgatagaccagctgaacctgtccttggagagggcggccaacagcgagtca
gaaaccaaagcagagattcaaaagttgcagagggaccttttggaggctactaccagttcg
cagaccggttccgagaagctcaaacagttccaaaaatcattgagcacctgcgagaacgaa
agacgcctgatcaacgaacgctttgaggttacccaacaaaacctcgccgaactgagaagg
aacaaccaaatcctccaggaccaagtgtccagactgaaccaagaattggccaataacgaa
gtcgtcaaatccagcctggagtcccagctcaggttggctcaatggccttctgagaccgtt
ggaggcggtaaagaggaagaagaactccacaggcagctgcagacctgccagaaagaaagg
aatgagtacagggcaaagctggacagcttgtcctcgaaaatgaggcatctggagaacgag
aatcgcaacctggagagatcgagcctgtccaagtcgttggccaggaccaagtcctacgag
ctgccgatggagaagtaccagatggacagccagcacagcgagacggagaaagataagcac
gagctagagaacagggagctgagatcgaagattgccaggctggagtcggagctgaccgaa
aaggagctggagttgagcaggttgcgcagcttgcagaggtctagtctggacgggaagttc
gacagggctgagatcgagagatacagggcggctcaattgcaggctgagaggctgttggag
gccagggagcagagttacaggcaacaggtggccaggttggagaaccaggtcagcctactg
agggaccagctgaaccaagaggtgaaacgcaggcagcagtacgtgctgcgaagtacgcag
gcgggccgcgagatggcgcaactcaggcaaaccttgggggacagcttgaagaccgtggcg
caagacccctccctcgattccctcctcctagaacacgagaccaagaggttggaccactcc
atagcagcgaccagtctacctccttccttagcactgccgacctcttcttccagcgcctac
ttgaggtcgctaacaccgcagccaaaatag
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integrated database retrieval system
