Harmonia axyridis (harlequin ladybird): 123671309
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Entry
123671309 CDS
T10650
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123671309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haxr03021
]
123671309
03019 Messenger RNA biogenesis [BR:
haxr03019
]
123671309
Transcription machinery [BR:
haxr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123671309
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
123671309
U7-dependent histone pre-mRNA processing factors
123671309
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_3
Lactamase_B_2
DUF4457
Motif
Other DBs
NCBI-GeneID:
123671309
NCBI-ProteinID:
XP_045461020
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All DBs
Position
1:complement(76852229..76859328)
Genome browser
AA seq
684 aa
AA seq
DB search
MSNKKRDNQVPAEESDQLLIRPLGAGQEVGRSCIMVEFKGKKIMLDCGIHPGLSGMDALP
FVDLIEADEIDLLLISHFHLDHCGALPWFLLKTNFKGRCFMTHATKAIYRWLLSDYIKVS
NIATEQMLYTEADLEASMDKIETINFHEEKEILGIKFWAYNAGHVLGAAMFMLEIAGIKI
LYTGDFSRQEDRHLMAAEIPTVHPDVLITESTYGTHIHEKREEREGRFTNLVHDIVNRGG
RCLIPVFALGRAQELLLILDEYWTQHPELHDIPIYYASSLAKKCMAVYQTYINAMNDKIK
RQIAVNNPFVFKHISNLKGIDHFEDVGPCVIMASPGMMQSGLSRELFESWCTDPKNGVII
AGYCVEGTLAKTILSEPEEITTMLGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPLHV
VLVHGEQNEMSRLKAALVREYEDDPNTTIHIHNPRNTHSVELAFRGEKTAKVMGSLAVEE
PQVGKNLSGILVKRNFNYHILSAEDLPKYTDMSMSQILQRQSIHYSGNMSVLRHFISQVA
GLLESVDEKKLKAFGAVEIIFEGKIVTLEWLANPINDMYADAIVAAILQADLLEAPIKNL
ATNVKVDRMHFKECLIEMLQDMFGEDSVPKIFKGEKLYVAVNDKRADIDLSTLKVECPDD
ETFQQIVQTAVSKLYQSLAPPQVE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaaaagagagataaccaagtacctgcggaggagagtgatcaactcttaata
agacctctaggagcaggccaggaagttggaagatcctgcatcatggttgaattcaaaggc
aaaaaaataatgcttgattgcggtattcaccctggtctatcaggaatggatgctcttcca
tttgttgatttgattgaagcagatgaaatcgatttgcttttaatttcacatttccatttg
gatcattgtggagctttgccctggtttttacttaaaacaaatttcaaagggcgttgcttt
atgacacatgctactaaagccatttatcgatggttactttcggattacataaaagttagt
aatatagctaccgaacaaatgctttatactgaagcagacttagaagcaagtatggataaa
attgaaacaataaatttccatgaggaaaaagaaattttaggtatcaaattttgggcatac
aatgctggtcatgttttaggagcagctatgttcatgctagaaattgctggtattaagatt
ttgtatactggagatttttctaggcaagaagataggcatttgatggcagcagaaatacca
actgtacatcctgatgttctcataacagaatcaacatatggtacccatatacatgaaaaa
agagaagaacgagaaggaagattcactaatctggttcatgatattgtaaatagaggtgga
cgttgccttatccctgtatttgcactgggaagagcacaagaattactactaattttagat
gaatactggacccaacacccagagctacatgatattcctatttattatgcatcttcttta
gcaaagaaatgtatggcggtttaccaaacttatatcaatgctatgaacgataaaattaaa
agacaaattgctgtcaacaatccatttgtgtttaaacatatatctaacttaaagggcatt
gatcactttgaggatgtaggtccatgtgtgataatggcttctccaggtatgatgcagagt
gggttgtcaagggaattattcgaatcatggtgcacggatcccaaaaatggtgttattatt
gctggttattgtgtagaaggaacattggcaaaaactattctttccgaaccagaagaaata
accaccatgttaggtcagaagttgccattgaaaatgtctgtagattatatatcattctcg
gctcacacggattaccagcaaacaagtgaatttataaggatattgaagcctctacatgtg
gtgctagtccatggtgaacaaaatgaaatgagccgactcaaagctgccttggttagagaa
tacgaggatgaccccaatacaacaattcatatacacaatcctagaaatacccattccgta
gaactggcattcagaggagaaaagacagctaaagttatgggatcgctggctgttgaagag
ccgcaggttggcaaaaacctttctggcattctagtcaaacggaacttcaattaccacatt
ttatcagcagaggatttgccaaaatatacggatatgagtatgagccaaattcttcagagg
caaagtatacattactctgggaacatgtcagttcttagacattttatttcacaagtggca
ggacttttagaatcggtggatgagaagaaattgaaagcttttggggcagttgagataatc
ttcgaaggaaaaattgttaccctggagtggctagcaaatccaatcaatgatatgtacgct
gatgcaattgtagctgcaatattacaagctgatcttttagaagcgcctatcaagaacttg
gctacaaatgtaaaggtcgataggatgcattttaaggaatgccttatagaaatgctgcaa
gacatgtttggagaggattcagttccaaaaatcttcaaaggtgaaaagttatatgttgct
gtgaatgacaagagagcagatattgacttgtcaaccttaaaagttgaatgcccagacgat
gaaacattccaacaaatagtacaaacagcggtgtctaagctatatcaatccttagctcct
ccacaggtggagtaa
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