Harmonia axyridis (harlequin ladybird): 123671470
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Entry
123671470 CDS
T10650
Name
(RefSeq) pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
haxr Harmonia axyridis (harlequin ladybird)
Brite
Spliceosome [BR:
haxr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
123671470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
TPR_15
TPR_19
ARM_TT21_5th
VPS53_C
Motif
Other DBs
NCBI-GeneID:
123671470
NCBI-ProteinID:
XP_045461286
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All DBs
Position
1:28673525..28685366
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AA seq
970 aa
AA seq
DB search
MNSDEDTKVPPRRTRSSSKTANSPQNVTPKATRKTKKKVVVMEVEVSDDEIAPESANETV
ISENIVNEVKDEDKLKDESVKENTEGTVEEQEVEKIENGNDSQTLKEEIDVLEEVEKMDV
DEINEPEIGNDNEQMETSNNETVEVKLAVDTTPTEDVTAEESATEAVNTEEYASEALKTE
ESATETVNTEESATEAVNTEESGNSIDDTAEVSIAEEEKTETADDKKTLNENEDVESQIK
EETKMECSNDPDTENISEDELPSVQAVKVPETEEVSDEELPGPKRAELPADTEVVSEDEL
PTVKKDGKRKLAEGEYDPGSPTSEAEVATKKFKEDKEVEKDKEEKINKPKKLPELDKFWK
AVNDDPTDFTGWTYLLQYVDQENDMEAAREAYDAFLSHYPYCYGYWRKYADYEKRKGNKK
KCEEVFERGLKAIPLSVDLWIHYLNYVKSSRQEDEEYVRSQFDRAISACGLEFRSDRLWD
SFIRWETDGKRLQRVTAIYDKLLSTPTQGYTAHFESFQEHISINPPNKVLEVDEFLALRK
EVKSLLKHDTSDAVESDAPPGDEDLNKIISTDEETKLIRERIISIRRKIYKNTVSAVSAR
WNFEEGIKRPYFHIKQLERCQLKNWQDYLDFEIQQGDKTRTIVLFERCLIACALYEEFWL
KFIHYLNTLKDDDTVVKIRDVYERACTIHHLKKPNLHLQWAIFEESNQNANRAAEILVNL
EKCVPNLIQVASRRIGLERRRGDYEKCCQFFEHYLNSSKNKATTSYHAIKYSRFQHKVMK
NYDKALEILKNAIVKDHSNPRLYLQYIDLAMQKEDVTEKEIVEIFNSFLEKENVDVDQKV
LFAQRKLEYLEDFSSEIQAIQKAFEDYQKCLKQSKDTALKRKDSKGESSSTKKEKSSAQP
TAQAGPYGPYGNYNASGQGSYQYSGSQPQGQYNYQQYGQNEQYPYQNWQYPQGGYGSYNQ
WGSYGSGYGY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgacgaagatactaaagttcctcctagaaggactagaagctcatcgaaaact
gcaaatagtccacaaaatgtaactcctaaagcaaccagaaaaaccaaaaaaaaagttgta
gtaatggaagttgaagtttctgatgatgaaatagctccagaatctgcaaatgaaacagtt
atatctgaaaatattgtgaatgaagtaaaagatgaggataagttgaaagatgaaagcgtt
aaagaaaatacggaggggacagttgaagaacaagaagtagaaaagatagaaaatggaaat
gattctcaaactcttaaagaagaaattgatgtattggaagaagtggaaaaaatggatgtt
gatgaaataaatgaaccagaaattggaaatgataatgagcaaatggaaacttcaaataat
gagactgttgaagtaaaattggcagttgataccactccaactgaagatgtaacagctgag
gaatctgcaactgaagcggtgaatactgaggaatatgcatctgaagctttgaaaactgag
gaatccgcaactgaaactgtgaatactgaggaatctgcaactgaagctgtaaatactgag
gaatctggaaattcaattgatgatacagctgaagtttctattgccgaagaagaaaaaact
gaaacagctgatgataaaaaaactctaaatgaaaatgaagatgtagagtctcaaatcaaa
gaggaaaccaaaatggagtgtagtaatgatcctgatactgaaaatatttctgaagatgaa
cttccttcagtacaagctgttaaagtccctgaaactgaagaagtttctgatgaagaattg
cctggacctaaacgagcggaattacctgctgatactgaggttgtttctgaagatgagctc
ccaactgttaaaaaagatgggaaacgaaaattagcagaaggtgaatatgaccctggttct
cccacatcagaagctgaagtagcaacaaagaaatttaaggaggataaagaagtagaaaaa
gataaagaagaaaagatcaataagccaaaaaaactaccagaattagataaattctggaaa
gcagtcaatgatgatcctactgattttactggatggacctacctactacaatacgtggac
caagaaaatgacatggaagctgcaagagaggcctatgatgcctttttatctcattatcca
tactgttatgggtattggagaaaatatgcagactatgagaaacgaaaaggcaacaagaag
aagtgtgaggaggttttcgagaggggattgaaagcgatacctctgtcagtggacctctgg
atccattacctcaactatgtgaaaagcagtaggcaagaagatgaagaatatgttaggtcg
cagtttgaccgagcaatctctgcatgtggtttggagtttcgatcagatcgcctctgggat
tcatttattaggtgggagacggatggtaaacgtttacaaagagtaactgctatctacgat
aaacttttatcaactccaactcagggatatactgcacatttcgaaagctttcaggagcac
atttctataaatccgccaaataaggtattggaagtggatgaatttttggcccttcgaaag
gaagtgaaaagtttattgaaacacgacacctcggatgcagtggaatcagatgcaccacct
ggagatgaggacctgaataagataataagtacagatgaagaaacaaagctcataagagaa
cgaataatatctatcagaagaaaaatttataaaaacacagtctctgcagtatctgcaagg
tggaattttgaagaaggcataaaaagaccttatttccacatcaaacaactggaaagatgt
cagcttaagaattggcaagattatcttgattttgaaatacaacaaggggacaaaaccaga
actattgttttatttgaaagatgtttgattgcctgcgctctttatgaagagttttggctg
aagttcatacattacctcaacacattgaaagatgacgataccgttgtgaaaataagagat
gtttatgagagggcttgtacaatccaccatctcaaaaagccaaatctacatctccagtgg
gccatatttgaagagtctaatcaaaatgccaacagagctgcagagattttagtcaacttg
gagaaatgtgtacctaatcttatacaagtcgccagcaggaggataggtttagaaagacga
aggggtgattacgagaaatgttgtcagttttttgaacattatctgaattcttctaaaaat
aaagcaacaactagctaccatgctatcaagtattccagattccaacataaggtgatgaag
aactatgacaaagctcttgagatattaaagaatgccattgtaaaagatcatagtaatcct
cgattatatttacaatatattgatcttgctatgcaaaaagaggacgttacagaaaaggaa
attgtggaaatattcaattcatttttggagaaagaaaatgtggatgtcgatcaaaaagtt
ctctttgcacagagaaaattggaatatttggaggacttcagtagcgaaattcaagcaatt
caaaaggcatttgaagattatcagaaatgcctgaagcaaagtaaagatactgctctcaaa
aggaaagatagcaagggtgaatcaagctcaaccaaaaaagagaaatcatctgctcaaccc
actgctcaggctggaccttatggaccctacggaaactataacgcatcaggccaaggttcc
taccaatattcaggttctcagccacaaggacaatacaattatcagcagtatggtcaaaat
gaacaatatccctatcaaaattggcaataccctcaaggtggatatggtagctacaaccag
tggggctcttatggcagtggttacggttattga
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