Harmonia axyridis (harlequin ladybird): 123671583
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Entry
123671583 CDS
T10650
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123671583
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
haxr03041
]
123671583
Spliceosome [BR:
haxr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
123671583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Gbeta
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_Aladin
NBCH_WD40
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
WD40_like
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
123671583
NCBI-ProteinID:
XP_045461463
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All DBs
Position
1:1910226..1913848
Genome browser
AA seq
503 aa
AA seq
DB search
MSDEEVQYVKKQKTIHYGSLEESERARLEQKDEDKSEDEETNSVPQVHTTNEYMELEDAM
SRDKQALLEEFERRKKARSINVSTDDAEVKRNLRQLGEPICLFGEGPAERRSRLREILSR
IGEDAVIRREAEEERKLFEKDQETTWYHEGPESLRIARHWIAHYSLPRAKERLEEARRLL
DCNSATKTAKMQELQKRIQVLSIHASQIGDTRPISFCQFSPDSKLLATASWSGLCKIWSV
PDCELKQVLKGHTCNVGAIVFHPQATLSLDENVCNMASCASDGSVKLWDLKGKEPIADIE
GHMPHRVSRMGFHPSGRFLGTCCYDNSWRLWDLQQCTEVLHQEGHVKPVHCITFQIDGSV
CATGGLDSFGRVWDLRTGRCIMFMEGHLQSIIGIDFSPNGYHIATASEDNTCKIWDLRKR
NILYTIPAHTNLISDVKFQRDGGDYLVTASYDNTAKLWTNRTWQPLKTLSGHDGKIMCCD
ISPDSQYIATCSYDRTFKLWAPE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgaagaagtacaatacgttaaaaaacagaaaaccatccactatggatctttg
gaagaatctgaaagagccagattggaacaaaaagacgaagataaaagtgaggatgaagaa
actaacagcgtacctcaagtacacactacaaatgaatatatggaactggaagatgctatg
tccagggacaaacaagcattgcttgaggagtttgaaaggaggaaaaaggctagatcgatt
aatgtttcaaccgatgatgctgaggtgaaaaggaatttgagacaacttggagaacccatt
tgtcttttcggagaaggtcccgccgagagaagaagtaggcttagggaaatattaagccga
ataggtgaagacgctgtaatcagaagagaagctgaagaagaacgcaaactttttgagaaa
gatcaagaaactacctggtatcatgaaggacccgaatctttgagaattgccaggcattgg
atagctcattattcattaccaagagcaaaggaacggctggaagaagcaagaaggttgctt
gattgtaacagtgctaccaaaacagctaaaatgcaagaactccaaaagagaatacaggta
ttgtcgattcatgccagtcagattggagatacaagacctatatctttctgtcaattcagt
ccagattccaaattactagcgactgcatcttggagtggtctctgtaaaatatggtctgtg
ccagactgcgaattaaagcaggtactgaaaggacatacctgtaatgtaggggccatagtt
tttcacccccaggctacactgagtcttgatgagaacgtttgcaatatggcatcttgtgct
tccgatggatctgtcaaattgtgggatttgaaaggaaaggaaccgattgcagacatagaa
ggtcacatgcctcacagggtttctcgcatgggattccacccttccggcagatttcttgga
acttgctgctacgataactcctggagattgtgggacttacaacagtgcaccgaagtgctc
catcaagaaggccatgtcaaacctgtacattgcattacgttccaaatagatggctctgtt
tgcgctacaggaggcttagattccttcggcagagtatgggacttgagaacaggcagatgc
atcatgttcatggagggtcatctgcaatccataatcggcatagacttctcccctaacggt
tatcacatagccacagcgagcgaagacaacacatgcaagatctgggacctgagaaagagg
aacatactgtacactatcccggcccatacaaacttgatttcggacgtgaagttccaaaga
gatgggggcgattacttggtgactgcctcctacgataacacagccaagttgtggaccaac
cgtacttggcaaccgttgaagactctttctggtcacgatggaaagattatgtgttgcgat
atatctccggatagtcaatatattgctacttgttcgtatgataggacatttaaattgtgg
gcccccgaatga
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