Harmonia axyridis (harlequin ladybird): 123671921
Help
Entry
123671921 CDS
T10650
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr04140
Autophagy - animal
haxr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
123671921
04148 Efferocytosis
123671921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
haxr04131
]
123671921
Membrane trafficking [BR:
haxr04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123671921
Hops complex
123671921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
TPR_Vps41
zf-C3HC4_2
zf-RING_16
zf-C3H2C3
zf-C3HC4
zf-RING_5
zf-RING_Vps41
zf-RING_11
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
123671921
NCBI-ProteinID:
XP_045461771
LinkDB
All DBs
Position
2:27040470..27051434
Genome browser
AA seq
993 aa
AA seq
DB search
MTSMFDQFEKASIRSKNNNIMAEMNTLDYINMTLADDVPIFSKTKKDFTPAYKVTHVVLE
NRYLVAALSNGSIFRMHLQSPNTRDEISLSKFTSCRLSNIFLDPTGHHLLISLVPTSKEV
GPELLYLSRKTNKLRATTKFRGHEFTEVAWNNLNTSESTTGPILLGTSKGMIFETEIVLD
GEKFFTSGFSSIEQYWRQLPNYLPLYGNREVEGLVFDIGKGTNTPITGLEYFEIPGANRL
IIFAATATKLYYFTGKGDQDDKPTLQQVFNRYLNVPEPETYIEVESNLRYSKLKFYSDNL
TTPNYFAWMTGKGITYGKLECNSTETLSTIKSNIKTIPFPKPKYEDYSVSQKFPIAIVVT
EFHILLAYADMVKGVCLLNEEVVYEDNYNEAFGKLVNILKDSRTGDIWVISETAVFQYKV
TREERNVWKIFADNQQFELAKKYSRGNEVCYNQVLIKEADMLFDKKKYELSAQIYAEAES
SFEEICLKYIQADQQDALKIFLRRKLDNLKPSDQTQITMIVIWLVELYLNRLEEKRLTGQ
GDTVAYLDIQKEFETFLALSEVSKCVKNNKSTIYDLMASHGDKANLMKSTIVNKDFEQLI
RQNIYKNSFHEALDVLKSQSNYELYYQFTPILIQEVPKHMVKALIENGKKLSPVRLLPAL
VSCEGEHHSKEVIKYLEFVTEKQKNSNKSLHNLLLSLYAKYEPSKLLDYLDSQGNELGMI
NFDVHFALRLCQERNLIKACVHLSCLLGLWESAVDLALEINLDLAKEIANKPPEEDVELR
KKLWLKIAQYVVAGKNDIQKAMEFLKQCELIRIEDILPFFSDFVTIEHFKEAICNSLKEY
NQHIQDLKEEMEEATKSAETVREDIMKFRNRCTYVNSSDVCDICNIMILIRPFYIFPCQH
KFHSDCLREELEPLLGPGKKHKLAELDKRLISLTRVDNVSMGSTGLSNLEMCRAEIDNII
ASECLYCGENMIQNIDKPFLDDIEYEIIKKEWE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagttcgaaaaggcatctattagatccaaaaataataacata
atggcagaaatgaatacgctggattatattaatatgactctagcagatgatgttcctata
ttcagcaaaactaaaaaagatttcactccagcttacaaagtcactcatgtagttcttgaa
aacagatatttggtggcagccttatcgaatggatctatttttcgaatgcatctacaatca
ccgaatactagagatgaaatttccctcagcaagtttacaagttgtcggttgagtaatatt
tttctagatcccactggtcatcacttattgatcagtttagtacctacatcaaaggaagtg
ggtccagaattactttatttatctagaaaaacgaataagttgagagctacaacaaaattt
cgaggacatgagtttactgaagtagcttggaacaatttgaatacatcagaaagcactact
ggaccaattttattgggaacttctaagggtatgatatttgaaactgaaattgtgctcgat
ggtgaaaagtttttcacatctggattttcttcaatagaacagtattggcggcagctcccc
aattatcttccactctatggcaatagggaagttgagggattggtgtttgatattggaaag
ggtaccaatactccaataactggtctggaatactttgagatacctggagccaacagactg
atcattttcgcagctacagctaccaaattatattatttcactggtaaaggagatcaggat
gataaaccaactttgcagcaagttttcaatagatatctcaacgtcccagagcctgaaacc
tatattgaggttgagagtaatctgagatattccaagttgaaattttattctgataattta
actacaccaaattattttgcttggatgactggtaaaggaataacatatggaaagcttgag
tgtaactctacagaaaccctttctacaataaaatcaaatatcaagaccattccgtttcct
aaaccaaagtatgaggattattctgttagccaaaagtttccaattgcaattgtggtaaca
gaatttcacatcctattagcctatgctgatatggtaaaaggtgtttgtttattgaacgag
gaagtagtttatgaagacaactataatgaggcttttggaaaactagtcaacattctaaag
gattcgagaacaggtgatatatgggttatcagtgaaacagcagtatttcaatataaagta
acaagagaggaaagaaatgtttggaaaatattcgctgataatcaacagtttgaattagca
aaaaaatattctagaggaaatgaagtatgttacaatcaggttctcataaaggaggctgat
atgctttttgacaaaaagaaatacgaactgagtgctcaaatatatgctgaagcagaatca
agttttgaggagatatgtttgaaatatattcaagctgatcaacaagatgctttgaaaata
tttctcaggagaaagttggataacctgaagccttcagaccagacacagataacaatgata
gtaatttggctagttgaactatacttgaataggttagaagaaaaaagattgacaggacag
ggagatacagttgcttatttggatatacaaaaggaatttgaaacattccttgctttatct
gaagttagcaaatgtgtcaaaaacaataaatccacaatttatgatctcatggctagtcat
ggagataaggccaatttaatgaaatcgactattgtcaataaggattttgagcagttaatc
agacaaaacatatacaaaaatagctttcatgaagctttggatgttcttaaaagtcagagc
aattatgaactctattaccaattcactccaattttaattcaagaggttccgaaacatatg
gtcaaagctttgatagaaaatggaaagaaattgtcacctgtgagattgttaccagcttta
gtgagttgtgaaggagaacatcattcaaaagaggtcataaagtatttggagtttgtgact
gagaaacagaagaattccaataagtctctacataatttgttgctttctctttatgccaaa
tatgaaccaagtaaattattagattatttggattcccaaggcaatgaacttggcatgatc
aattttgacgttcatttcgctcttcgtttatgccaggaaagaaatcttataaaagcatgt
gtccatctttcatgcctcttaggcttgtgggaatcagccgttgatcttgcattggaaata
aatctagaccttgccaaagaaattgctaataaaccacctgaagaagacgtagaactaaga
aagaagctgtggttgaaaattgctcagtatgtcgttgctgggaaaaatgacattcagaaa
gctatggaattcctgaaacagtgtgaactcataagaatcgaagatattcttccattcttc
tctgactttgtgaccattgaacacttcaaagaagctatctgtaattcattgaaggaatat
aaccaacacattcaagatttgaaagaagaaatggaagaagctacaaagtctgcagaaaca
gtgagagaggatataatgaaattcagaaataggtgtacatatgttaatagctctgatgta
tgtgatatatgcaacattatgattttgataaggccgttctacatttttccatgtcagcat
aaattccattccgactgtttaagagaggagttggaacctttgttaggtcctggtaaaaaa
cataaattagctgaattggataagagactaataagtttgacaagagtggataatgtaagc
atgggttctactggtctttcaaatttagaaatgtgtagagcagaaatagacaatataata
gcttcagaatgtctatattgtggagaaaatatgattcaaaatattgataaacctttctta
gatgatattgaatatgaaataataaaaaaagaatgggaatga
DBGET
integrated database retrieval system
