Harmonia axyridis (harlequin ladybird): 123672138
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Entry
123672138 CDS
T10650
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03013
Nucleocytoplasmic transport
haxr03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
haxr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123672138
mRNA cycle factors
P-body specific factors
123672138
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Ig-like_KY
Motif
Other DBs
NCBI-GeneID:
123672138
NCBI-ProteinID:
XP_045462086
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Position
2:427641..434458
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AA seq
1125 aa
AA seq
DB search
MTAHTSEKKDDENTQESEEAEKAELEQYIKEFQERLTAKQELRATNQNAQNIRPPESSFS
KLDSNVKRNTSFVKKIKNFTANQLETYIKDMSGLNLSKYISEVAAGLVDAKLKMTDVYAV
VKLSSLLNQTYGDFSQLLFENWQKNLSIKPGDKIANPSKLRVDLRLYADLVQAGIFNNKN
SFTLLGNVLTTLISMDKEEHSNMSIILSFCKHCGEDYAGLVPKRMKMLEEKYKMPIPRST
FLPPEKQQNVKSLLRDYFMSLSKHVVKDHQEILNFEKQNIRILQTKGELSVERKEKLQNM
QVAFEKLHNSAKSFAEILDENMPLLKAQTPVQNQENMIVTGAGPDIEEGSQSFIEKIWVD
SETQKFYCQLPELQAFLPSSFINKTTAVAPPDVVTEEVLDSELPTETDEICEEEGKIEDT
TLAPEEDVEETTVSTASNKIVLEAFLNNLHNCVNREMIDNAAIDFLVTLNTKHNRKKLVR
ALFVVNRTRLDLLPFYARFVAILHPAVPEVGNELCQMLRHDFKYHVRKKDQINIESKIKV
VRFIGELVKFQLYPKIEGLYCLKILLHDFSHHHIEMACNFLEVCGRFLYCSPDSHQRTKV
YLEQMMRKKSVLTLDSRYVTQIENAYYYVNPPEVVTVAKKERPVLHQFIRKLLYQDLQKN
NIDKVMRLMRRLNWSDEAIAAYAVKCLTNAYNVKYYNIRCLANLLAGLVSYQEEIGTKVV
DGVLEDIRLGMEKNLQKYNQRRVAQVKYLGELYNYRMVESADVFKVFYSLITFGVSLDPL
VTSPLDPPNHLFRIRLVCILLETCGTYFSSGSSKKRLDYYLTFLQGYYWFKKTHWGDSFP
PFLDHIFKETILTLRPKLKLCRSYEDAQKEVENIRVSLGIENMLASEAKTNGDLLDTIAE
TDNEEFGDEEISESAPGRSTDETATEDEVVDHTQGSDDEGDIQSEADPVSESLAIPAAPK
KVECPEDDEFQNALDKMVSENIQERMREPVKASNIDISVPVVMKTNMKKSYDQLQEHGEG
DNNKIGFVLMVRKGNKQQYKAFQADKNSELAQNLRDQEIAQKEEKERVKRLTLNITERLE
EEDYQELVQQQNRPVTQNYNRERKKYQHPKGAPDADLIFGPKKVR
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacatacttcagagaaaaaagatgatgaaaatacacaagagagtgaagaagca
gaaaaggcggaattagagcaatatataaaagaatttcaagaaagactcactgcaaagcaa
gaactacgtgctacaaatcaaaatgcacaaaatatccgaccccctgagtcctctttcagt
aaactggattcaaatgtaaaaagaaacacttccttcgttaaaaaaattaaaaactttact
gccaaccaactggaaacttatatcaaagatatgtctggtttgaatttatcaaaatatata
tctgaggtagctgctggattagtagatgccaaactgaaaatgaccgatgtttatgcagtt
gtaaagttgtctagtttattgaatcaaacttatggggatttttcccagctgttatttgaa
aattggcagaaaaatttgtctattaaaccaggagataaaattgcaaatccaagtaaattg
agagttgatcttaggctttacgcagatttggtgcaagccggaatttttaataacaaaaat
tcttttacattattgggtaatgttttaacaactttaataagtatggataaagaagaacat
agcaacatgtcaattattcttagtttttgtaaacattgtggggaagactatgcaggtttg
gtaccaaaaagaatgaaaatgttggaagaaaaatacaaaatgcccattcctcgcagtact
tttttgcctccagaaaaacagcaaaatgtgaagtccttactcagagattattttatgagt
ctgagtaaacatgtagtgaaggatcatcaagaaatattgaattttgagaaacaaaacata
agaatattacaaaccaagggagaattaagtgtagaaagaaaagaaaaattacaaaatatg
caagttgcttttgaaaaactgcataattctgccaagagctttgctgagatcttggacgag
aacatgccattactcaaagctcagacacctgttcaaaaccaagagaatatgattgtgaca
ggagccggtccagacattgaggaaggctcgcaatctttcatcgaaaaaatttgggttgat
tcagaaacacaaaaattctactgtcaactacctgaactacaggcatttctgccgtcttca
tttatcaacaagacaaccgcggttgctcctccagatgttgttacagaagaagtactggat
tctgagctaccaacagaaactgatgaaatatgcgaagaagaaggtaaaattgaagataca
acacttgcccctgaggaagatgttgaagaaacaactgttagcacggctagtaacaagatc
gttctcgaggcattcttgaataatctacacaattgtgtcaacagagagatgatagacaat
gcagccatcgatttcttggtgactttgaacactaaacacaaccgcaagaagttggtacgt
gccctgttcgtcgtgaacaggacacgattggatcttttacccttctatgcgagatttgta
gctatccttcaccccgctgttcccgaagtaggaaacgaactgtgtcagatgcttcgtcat
gatttcaagtaccatgtccgaaagaaggatcagatcaacatcgagtccaaaattaaggtg
gtgcgattcatcggtgagctggtaaaattccagctttatcccaagatcgagggcctgtac
tgtctgaaaatactcctgcacgatttctctcatcatcacatcgaaatggcatgcaacttc
ctggaggtctgcggtagattcctctactgcagccccgactctcaccaacgtacgaaagtc
tacttggaacagatgatgaggaagaaatcggtgttgactttagattcccgctacgtgacg
cagatcgaaaacgcctattattacgtgaatcccccggaggttgttactgtagcgaagaaa
gagaggcccgttctgcaccaattcattcggaaactgctgtatcaagacctgcagaagaac
aatatcgataaggtcatgaggctgatgaggaggttgaattggagcgatgaggccatcgct
gcctatgccgtaaagtgtctaacgaacgcttataacgtcaaatattacaacatcagatgc
ttggccaaccttctggcaggtctggtgtcgtatcaagaagaaatcggtaccaaagtagta
gacggagtattagaagatatcaggttaggtatggaaaaaaatttgcaaaaatataatcaa
cgacgagtggcacaagtcaagtatttgggagaattgtataattacagaatggtagagagt
gctgatgtgtttaaggttttttactccttgataacttttggagtttcgctggatccttta
gtgacatcccctctggatcctccgaatcatttgttccgtattcgtttagtgtgtatacta
cttgaaacttgtggaacttatttcagtagcggaagcagtaagaaaagactggactattac
cttacattcctacaaggttactattggttcaagaagacccactggggggattcttttcca
cccttcctagaccacattttcaaggaaaccattctaaccctaaggcccaagttgaagcta
tgccgaagctacgaagacgctcagaaggaagtggagaacataagggtgtctttgggcatc
gaaaacatgcttgcttccgaagcaaagaccaacggtgatttattggacaccatagcggaa
accgataacgaggaatttggcgatgaggaaatctcagagtctgctccgggacgttccact
gatgagactgcaacggaagatgaggttgtggaccacacacagggttccgatgacgaaggt
gatatacagagtgaagcggatcctgtgtccgagtcgcttgcaatacctgcagctcccaaa
aaagtggaatgcccagaggatgatgaattccagaacgccttggacaagatggtttccgag
aacattcaagaaagaatgagagaacctgtcaaggctagtaatatagatatctcagttccg
gttgttatgaaaacgaatatgaagaagagttacgaccaattacaggaacatggagaaggc
gacaacaataaaataggctttgttttgatggttcgcaaaggcaacaagcaacaatacaaa
gctttccaagcggataaaaattccgaactggcccaaaatttgagagatcaggaaatagcg
caaaaagaggagaaagagagggtgaagcgtctgactttgaatataacggagcgtttagag
gaagaagattatcaggaattagtacaacaacaaaatagacctgttacgcagaattacaac
agggaaagaaaaaagtatcagcatcccaaaggagctccagatgccgatttgatatttggg
ccgaaaaaagttaggtaa
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