KEGG   Harmonia axyridis (harlequin ladybird): 123672203
Entry
123672203         CDS       T10650                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
haxr  Harmonia axyridis (harlequin ladybird)
Pathway
haxr03250  Viral life cycle - HIV-1
haxr03272  Virion - Hepatitis viruses
haxr04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:haxr00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    123672203
   03272 Virion - Hepatitis viruses
    123672203
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    123672203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:haxr04131]
    123672203
   03400 DNA repair and recombination proteins [BR:haxr03400]
    123672203
Membrane trafficking [BR:haxr04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    123672203
DNA repair and recombination proteins [BR:haxr03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    123672203
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 AAA_22 AAA_16 AAA_14 TIP49 RuvB_N IstB_IS21 DUF815 AAA_2 AAA_18 NPHP3_N nSTAND3 AAA_17 nSTAND_NTPase5 RNA_helicase AAA_33 PhoH ResIII Mg_chelatase AAA_24 AAA_28 AAA_7 USP8_dimer NACHT HAT_Syf1_CNRKL1_C Viral_helicase1 Parvo_NS1 bpMoxR Sigma54_activat AAA_30 ABC_tran MIT_ATG38 TAtT
Other DBs
NCBI-GeneID: 123672203
NCBI-ProteinID: XP_045462173
LinkDB
Position
2:complement(1888023..1890977)
AA seq 439 aa
MAAGTTLQKAIELVTKATEEDRNKNYEEALRLYEHGVEYFLHAIKYEAQGEKAKESIRAK
CTQYLERAEKLKESLKKGHRKPIKDGENGSKDDKKSDSDEEDGEDPEKKKLEGRLEGAIV
VEKPNVKWSDVAGLDAAKEALKEAVILPIKFPHLFSGKRAPWKGILLFGPPGTGKSYLAK
AVATEANNSTFFSVSSSDLVSKWLGESEKLVKSLFEMARSHKPSIIFIDEIDSLCSSRSD
NESESARRIKTEFLIQMQGVGHDTDGILVLGATNIPWVLDSAIRRRFERRIYIPLPEEHA
RVTMFKIHLGNTQTTLSEEDIKELGRRTEGYSGADISIVVKDALMQPVRKVQTATHFKKV
RGPSPKDPNLMVDDLMTPCSPGDPGAIEMSWSELEGDKLAEPPVTMGDILKSLATSKPTV
NEEDLVRLQKFTADFGQEG
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggctgcaggaacaacccttcaaaaagctatagaattggtgacaaaagcgaccgaagaa
gataggaataaaaattatgaagaagctctaaggttatatgaacatggggttgagtatttc
cttcatgcaattaaatacgaggctcaaggagaaaaggcgaaagaaagtataagagctaaa
tgtacacaatatttggaaagagccgaaaagttgaaagagtctctgaaaaagggacacagg
aaaccaattaaggatggggaaaatggatctaaagatgataagaaaagtgatagtgatgaa
gaagatggagaggaccctgagaagaaaaaattggagggtagactagaaggggctatagtt
gttgaaaaaccaaatgttaagtggtctgatgtggctggactagatgctgctaaggaggcg
ttgaaggaagctgtcatcctgcctatcaaatttccccatttattcagtggtaaaagagca
ccatggaagggtattcttttgttcgggccccctggtactggtaaatcttacttggccaag
gctgtagcaaccgaagccaataactccaccttcttctccgtatcgtcatcggatctagta
tcaaaatggctgggtgaatcagagaagttagtaaaaagccttttcgaaatggccagatca
cataaacccagtataatcttcatagacgaaattgactcattgtgttcgtctagatcggac
aacgaatcggaatctgctcgtaggataaagacagagttcctcatccaaatgcagggtgtt
gggcatgacacggatggtattttagttttgggagccaccaatataccgtgggtactggat
tctgccatccgtaggagatttgagagaagaatctacatacctctgcctgaagaacatgcc
cgtgtcaccatgttcaagattcacttgggaaacacacaaactaccttgtccgaagaagat
ataaaagaattaggtcgaaggactgaaggatattcgggagctgatatcagcattgtagta
aaagatgccctgatgcagcctgtgcgtaaagtacaaactgctacccatttcaagaaagtc
agaggacctagccctaaggaccccaatttaatggttgacgatttgatgaccccttgttca
cctggggatccgggagctattgaaatgtcttggtcagagttggaaggagataaattagcc
gaaccgcctgttactatgggtgatatactcaaatctttggccacctctaagccaactgtc
aatgaagaggacctagtaaggcttcagaaattcaccgccgactttggtcaagaaggatag

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