KEGG   Harmonia axyridis (harlequin ladybird): 123672987
Entry
123672987         CDS       T10650                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
haxr  Harmonia axyridis (harlequin ladybird)
Pathway
haxr03030  DNA replication
haxr03410  Base excision repair
haxr03420  Nucleotide excision repair
haxr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haxr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123672987
   03410 Base excision repair
    123672987
   03420 Nucleotide excision repair
    123672987
   03430 Mismatch repair
    123672987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haxr03032]
    123672987
   03400 DNA repair and recombination proteins [BR:haxr03400]
    123672987
Enzymes [BR:haxr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     123672987
    6.5.1.6  DNA ligase (ATP or NAD+)
     123672987
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     123672987
DNA replication proteins [BR:haxr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    123672987
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     123672987
DNA repair and recombination proteins [BR:haxr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     123672987
   NER (nucleotide excision repair)
    Other NER factors
     123672987
   MMR (mismatch excision repair)
    Other MMR factors
     123672987
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme FERM_N_2
Other DBs
NCBI-GeneID: 123672987
NCBI-ProteinID: XP_045463310
LinkDB
Position
2:complement(32813214..32819688)
AA seq 854 aa
MSIIFRSLRISSSLNRIINIKELNCFFSKIRSSQLAGSVDSGKSSKRSRDSIELTPTKKP
IEKDNETTINAKKIKLDPSKNKSHCNKATNDSKISSDEDSPIKRNTKKKNAFDSESESDS
NDTTKSPIKNGEKSLSSSKEGTSKNSPESKVINEKTPKSDEKNLEKKPENKRKESVIEKT
ASPKSKNSKYACTDEEDAKLPDTFNPAKGKYNPIKDAIWKREQKIPYLALAKTLMEIEEI
SSRLKIVEILSNYFRSCIVLTPEDLLPSVYLCLNKLGPAYEGLELGVAETSLMKAIAQST
GRTLSQIKADVKETGDLGTVAEHSRTNQKTLFQPPPLSVRGVFKSLKQISQMTGHASQAT
KIDEIKKMFVACKEMEARYLIRSLAGKLRIGLAELSVLQALALSCAMTPPNQEFPPTRLD
VSKEMSAEDFKTYYDKLAFTLKNTYCECPNYDLIIPVLLKEGIEKLPEHCKLTPGIPLKP
MLAHPTKGVQEVLNRFEGLKFTCEWKYDGERAQIHMDGKTVHIYSRNQENNTSKYPDIIS
RLDLCKSDNVKSCILDCEAVAWDSENKAILPFQVLSTRKKKGVKEEDIKVQVCVFMFDLL
YFNGESLIKKPFIERRTILKDNFKESEGHWYFATYLDTSKMEEVQEFLEESVKGNCEGLM
VKTLEKDATYEIAKRSHNWLKLKKDYLEGVGDTLDVVVIGGYLGKGKRTGTYGGFLLACY
DQDNEEYQSICKIGTGFTDENLQKHTEFFKEHVVENPKPYYRFEESLAPDHWFEPVQVWE
IKCADLSLSPIHRAGIGIVDPQKGISLRFPRFIRIREDKTVEEATSAQQVAEMYSSQDQI
KNQQTLKVSEEDFY
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgtctataatttttcgttctttgagaatatcttcatcattgaaccgaatcataaatatt
aaagaattgaattgttttttctctaaaatcagaagcagtcagttagctggatctgtcgat
tctgggaaatcaagtaaacgttcgagagattctatagaattaacacctactaagaaacct
atagaaaaagataatgaaacaacaataaatgctaaaaaaatcaaattagacccttctaaa
aataagtcccattgtaataaggcaacaaatgatagcaaaatttcatcagacgaagattca
ccaataaaaaggaatactaaaaagaagaatgcatttgatagtgaatctgaatctgacagc
aatgataccaccaaatctcctataaaaaatggagagaagagtttgtcttcctctaaagaa
ggaacaagtaaaaattcacctgaatcgaaagttataaatgaaaaaactcctaaatcagat
gaaaaaaatttggagaaaaaaccagaaaacaagagaaaagagagcgtaattgagaaaact
gcatctccaaaatctaaaaattccaagtatgcctgtactgatgaagaggatgccaaactt
cctgatacattcaatcctgccaaagggaagtataatcctattaaagatgcaatatggaaa
agggaacagaaaataccatacttggccctagcaaaaactcttatggaaatagaagaaatc
tctagtagattgaagatagttgaaattttaagtaattattttcgatcttgcattgtactt
acacctgaagatttgttgccttctgtatatttgtgccttaataagttgggtccagcgtat
gaaggtctagaattaggagttgcagaaacaagtttaatgaaagcaattgctcaatctact
ggacgtactcttagccaaatcaaagcagatgttaaggaaactggtgatcttggtacagta
gcggagcattcaaggacaaatcaaaaaacactatttcaacctccacctctttctgttaga
ggggttttcaagagtttgaaacaaatctcacaaatgactggacatgcatcacaagcaacc
aaaatagacgaaattaaaaaaatgtttgtggcttgtaaagaaatggaagcaagatatttg
atcaggtcactagcaggaaaattaaggataggtttagcagaattatcagttttacaagca
ttggcattatcatgtgctatgactccacctaatcaagaatttcccccaacacgacttgat
gtttctaaagagatgagtgctgaagatttcaaaacgtactacgataaattggcattcact
ttgaagaacacctactgtgagtgtccaaattatgaccttattataccagttttactcaag
gaaggtattgaaaaattaccagaacattgtaagcttactccaggaatacctctgaaacct
atgttggcacatcctactaaaggtgttcaagaagttctcaatagatttgaaggtctcaaa
tttacgtgcgaatggaaatatgatggagaaagagctcaaatacatatggatggtaaaaca
gttcacatttacagtagaaatcaagaaaacaatacatcaaaatatcctgatattatttct
cgtctagatttatgtaaaagtgataacgtaaagtcctgtattttggattgcgaagcagtt
gcttgggattctgaaaataaagcaattctgcctttccaagttttgagtaccagaaagaaa
aaaggtgtaaaagaagaggatattaaagtacaagtttgtgtatttatgtttgatctactt
tattttaatggtgaatcactaatcaaaaaacccttcattgaaagaagaaccatactgaaa
gataatttcaaagaatctgagggacattggtattttgctacatatttagacacatctaaa
atggaagaagtacaagaattcttagaagaaagtgttaaaggtaattgtgaaggtcttatg
gtgaaaactttggaaaaagatgctacctatgaaattgctaagagatcacataactggttg
aaattgaaaaaggattacctggaaggagttggtgatacacttgacgttgtagtcattggg
ggttacttgggaaaaggaaagaggactgggacttatggtggcttcctgttagcatgttac
gatcaagataatgaagaataccaaagtatttgcaagattggaacaggttttacagatgaa
aacttacagaagcatactgaatttttcaaggaacatgttgtagaaaatccaaaaccatat
tatcgctttgaagaatctctcgcaccagatcattggtttgaacctgtccaagtttgggag
ataaaatgtgcagatctttcattatcccctatccatagagctggaataggcatagtggat
cctcaaaaaggtatctcattgagattcccccgttttattagaataagagaagataaaact
gttgaagaagctacttctgcacagcaagtagctgaaatgtattcaagtcaagatcagata
aaaaatcagcaaacattgaaagtttcagaagaagatttctattga

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