Harmonia axyridis (harlequin ladybird): 123673126
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Entry
123673126 CDS
T10650
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
haxr Harmonia axyridis (harlequin ladybird)
Pathway
haxr03082
ATP-dependent chromatin remodeling
haxr03083
Polycomb repressive complex
haxr04213
Longevity regulating pathway - multiple species
haxr04330
Notch signaling pathway
haxr04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
haxr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123673126
03083 Polycomb repressive complex
123673126
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123673126
04350 TGF-beta signaling pathway
123673126
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
123673126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
haxr03036
]
123673126
Enzymes [BR:
haxr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123673126
Chromosome and associated proteins [BR:
haxr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
123673126
HDAC complexes
Sin3A-HDAC complex
123673126
BRAF-HDAC complex
123673126
REST complex
123673126
SHIP complex
123673126
MiDAC complex
123673126
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
123673126
Heterochromatin formation proteins
Other heterochromatin formation proteins
123673126
Chromatin remodeling factors
NuRD complex
123673126
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
123673126
NCBI-ProteinID:
XP_045463521
LinkDB
All DBs
Position
2:22970164..22978541
Genome browser
AA seq
486 aa
AA seq
DB search
MATQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
AEEMTKFHSDDYIRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFMMVGG
GGYTIRNVSRAWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTPDYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDAINDDSDMEDKADKDERLPQKEIDKRLGHDNEF
SDSEDEGEGGRRDSRNYRGKKRPRFDKSDSKDVNMEVKEEVKSEKSDDDTKLSIIEDTKK
EGGPNQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggctactcaacctcacagccgaaaaagagtgtgttattactatgatagtgatattgga
aattattactatggccagggacatcccatgaaacctcatcgcatacgtatgactcataat
ttactcttgaattatggattataccgtaaaatggaaatttatcgacctcataaagcaaca
gccgaagaaatgactaaatttcactcagatgattacataaggttcctacgctctataagg
cctgataacatgtctgaatataacaaacaaatgcagcgattcaatgttggtgaagactgt
ccagtttttgacggattatatgaattctgtcagctctcagcaggaggttctgtggctgca
gctgttaagttgaacaaacaagcatctgaaatatgtattaactggggtggtggtttacat
cacgctaaaaagtctgaagcatctggattctgctatgttaatgacatcgtattaggaata
ttggaattacttaaatatcatcagagggttctctatattgatattgatgttcatcatggt
gatggtgttgaagaagctttttatactactgatcgtgtaatgacagtgtccttccataaa
tatggagagtacttcccaggaactggtgacctcagagacattggtgcaggcaaaggaaaa
tattatgcagtcaatatacccctcagagatggcatggatgatgatgcctatgaaagcata
tttgtgccgataatcagtaaagttatggaaacatttcaacctagcgctgttgtactccaa
tgtggagccgattctctaacaggagatcggttaggttgcttcaatttgactgttaagggt
catggcaagtgtgtagaattcgtgaagaaatataatttgcccttcatgatggttggtgga
ggaggttacacaataagaaatgtctctcgtgcttggacctatgaaacttcagtagcctta
ggagtagaaattgccaacgaacttccttacaatgattacttcgaatattttggacctgac
tttaaactccacatcagtcctagcaatatgactaaccaaaacacgcccgactatttggag
aagatcaaaacaagactattcgaaaatttgaggatgttgcctcatgctccaggtgtacaa
gtacaggcaattccagaagatgccattaacgatgactctgacatggaagacaaagcggac
aaagatgaacgattgccacaaaaagaaatagataagagacttggacatgataatgaattt
tccgatagtgaggatgaaggagaaggaggtcgaagggacagcagaaactataggggcaag
aaacgaccacgattcgataagtcggacagtaaggatgtgaatatggaagtaaaagaagaa
gtgaagtctgaaaaaagcgatgacgataccaaactcagtatcatagaagacacgaaaaaa
gaaggtggtccgaatcaatga
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